Factsheet for VIT_17s0000g05330.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0026g01080.t01	Wine grape	cytosol	94.44	94.44
VIT_14s0066g02240.t01	Wine grape	cytosol	94.12	94.12
EES06511	Sorghum	cytosol	93.14	93.14
EER88560	Sorghum	cytosol	93.14	93.14
GSMUA_Achr1P11730_001	Banana	cytosol	92.81	92.81
Os06t0574500-01	Rice	cytosol, plasma membrane	92.81	92.81
TraesCS6A01G183700.1	Wheat	cytosol	92.81	92.81
TraesCS6B01G213200.1	Wheat	cytosol	92.81	92.81
TraesCS6D01G171400.1	Wheat	cytosol	92.81	92.81
Os02t0217600-02	Rice	cytosol, plasma membrane	92.81	92.51
HORVU7Hr1G086410.1	Barley	cytosol	92.48	92.48
TraesCS7B01G263500.1	Wheat	cytosol	92.48	92.48
TraesCS7D01G358600.1	Wheat	cytosol	92.48	92.48
Zm00001d046369_P002	Maize	cytosol	92.16	92.16
TraesCS7A01G364400.1	Wheat	cytosol	91.83	92.13
GSMUA_Achr7P23950_001	Banana	cytosol	91.5	91.5
Zm00001d016378_P002	Maize	cytosol	92.48	83.73
Zm00001d036949_P007	Maize	cytosol	81.37	80.84
VIT_06s0004g00830.t01	Wine grape	cytosol	79.41	77.39
HORVU6Hr1G038770.1	Barley	cytosol	92.48	74.28
GSMUA_Achr3P20430_001	Banana	plastid	83.01	71.95
VIT_19s0090g01290.t01	Wine grape	cytosol	65.03	65.25
VIT_13s0156g00060.t01	Wine grape	cytosol	79.08	60.8
Zm00001d053589_P001	Maize	cytosol	61.76	60.0
GSMUA_AchrUn_...	Banana	cytosol	92.48	59.7
VIT_10s0071g00950.t01	Wine grape	cytosol	57.19	57.76
VIT_08s0056g00220.t01	Wine grape	cytosol	43.46	44.78
VIT_06s0004g05530.t01	Wine grape	cytosol	43.14	43.85
VIT_13s0019g02410.t01	Wine grape	cytosol	44.12	43.13
VIT_02s0025g00480.t01	Wine grape	cytosol	43.46	41.69
VIT_14s0060g01750.t01	Wine grape	cytosol	44.12	41.54
VIT_05s0049g00890.t01	Wine grape	cytosol	44.12	41.41
VIT_14s0036g00370.t01	Wine grape	cytosol	43.14	36.36

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100267243	wikigene:100267243	MapMan:13.4.1.2.3	MapMan:18.4.24.1.2.5
Gene3D:3.60.21.10	UniProt:A5BSB5	EMBL:AM469216	ProteinID:CAN74947	ProteinID:CAN74947.1	ProteinID:CCB43136
ProteinID:CCB43136.1	InterPro:Calcineurin-like_PHP_ApaH	EMBL:FN594950	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	InterPro:IPR029052	EntrezGene:LOC100267243	wikigene:LOC100267243	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF375	SMART:SM00156	SUPFAM:SSF56300
InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0001521982	ArrayExpress:VIT_17s0000g05330	EnsemblPlantsGene:VIT_17s0000g05330	EnsemblPlants:VIT_17s0000g05330.t01	unigene:Vvi.20955
RefSeq:XP_002267386	RefSeq:XP_002267386.1	:	:	:	:

Description

Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A5BSB5]

Coordinates

chr17:-:5815017..5818306

Molecular Weight (calculated)

34999.6 Da

IEP (calculated)

4.698

GRAVY (calculated)

-0.327

Length

306 amino acids

Sequence
(BLAST)

001: MPSQADLDRQ IEHLMECKPL PEAEVKALCE QAKSVLVEEW NVQPVKCPVT VCGDIHGQFH DLIELFRIGG KAPETNYLFM GDYVDRGYYS VETVSLLVSL
101: KVRYRDRITI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRAL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IASQFNHTNG LTLISRAHQL VMEGYNWCQE KNVVTVFSAP NYCYRCGNMA AILEIGENMD QNFLQFDPAP RQIEPDTTRK
301: TPDYFL

Best Arabidopsis Sequence Match ( AT1G10430.1 )
(BLAST)

001: MPSNGDLDRQ IEQLMECKPL SEADVRTLCD QARAILVEEY NVQPVKCPVT VCGDIHGQFY DLIELFRIGG NAPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRLTI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRSL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAAQFNHNNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENME QNFLQFDPAP RQVEPDTTRK
301: TPDYFL

Arabidopsis Description

PP2A2Serine/threonine-protein phosphatase PP2A-2 catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q07098]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.