Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- plastid 1
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g030490.2.1 | Tomato | cytosol | 85.62 | 88.16 |
| KRH73092 | Soybean | cytosol, nucleus | 88.82 | 87.97 |
| KRH15048 | Soybean | cytosol | 88.5 | 87.94 |
| PGSC0003DMT400017290 | Potato | cytosol | 85.3 | 87.83 |
| CDY61002 | Canola | cytosol | 89.14 | 87.74 |
| CDY24946 | Canola | cytosol | 88.82 | 87.42 |
| CDY20490 | Canola | cytosol | 87.54 | 87.26 |
| AT2G39840.1 | Thale cress | cytosol | 89.46 | 87.23 |
| VIT_06s0004g05530.t01 | Wine grape | cytosol | 83.07 | 86.38 |
| CDY10577 | Canola | cytosol | 80.19 | 86.25 |
| TraesCS4B01G210800.1 | Wheat | cytosol | 87.86 | 85.67 |
| Bra005009.1-P | Field mustard | cytosol | 79.23 | 85.52 |
| Os03t0268000-01 | Rice | cytosol | 87.86 | 85.4 |
| HORVU4Hr1G060490.1 | Barley | cytosol | 87.54 | 85.36 |
| TraesCS4A01G093600.1 | Wheat | cytosol | 87.54 | 85.36 |
| TraesCS4D01G211500.1 | Wheat | cytosol | 87.54 | 85.36 |
| GSMUA_Achr8P19510_001 | Banana | cytosol | 75.4 | 84.59 |
| HORVU4Hr1G060530.1 | Barley | mitochondrion, peroxisome | 84.03 | 84.57 |
| EER95117 | Sorghum | cytosol | 86.9 | 84.47 |
| Zm00001d047835_P003 | Maize | cytosol, extracellular, plasma membrane | 84.98 | 82.35 |
| VIT_05s0049g00890.t01 | Wine grape | cytosol | 82.11 | 78.83 |
| VIT_08s0056g00220.t01 | Wine grape | cytosol | 73.48 | 77.44 |
| VIT_02s0025g00480.t01 | Wine grape | cytosol | 77.64 | 76.18 |
| VIT_14s0036g00370.t01 | Wine grape | cytosol | 84.66 | 73.0 |
| VIT_14s0060g01750.t01 | Wine grape | cytosol | 74.12 | 71.38 |
| Zm00001d028568_P004 | Maize | cytosol | 87.22 | 66.59 |
| Bra000153.1-P | Field mustard | cytosol | 88.82 | 56.73 |
| VIT_19s0090g01290.t01 | Wine grape | cytosol | 44.41 | 45.57 |
| VIT_01s0026g01080.t01 | Wine grape | cytosol | 44.41 | 45.42 |
| VIT_14s0066g02240.t01 | Wine grape | cytosol | 43.77 | 44.77 |
| VIT_17s0000g05330.t01 | Wine grape | cytosol | 43.13 | 44.12 |
| VIT_06s0004g00830.t01 | Wine grape | cytosol | 43.45 | 43.31 |
| VIT_10s0071g00950.t01 | Wine grape | cytosol | 41.21 | 42.57 |
| VIT_13s0156g00060.t01 | Wine grape | cytosol | 43.13 | 33.92 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | EntrezGene:100259840 | wikigene:100259840 | MapMan:18.4.24.1.1 | Gene3D:3.60.21.10 |
| ProteinID:CCB56302 | ProteinID:CCB56302.1 | InterPro:Calcineurin-like_PHP_ApaH | UniProt:F6HNT3 | EMBL:FN595998 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0006470 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010161 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR029052 | EntrezGene:LOC100259840 | wikigene:LOC100259840 |
| InterPro:Metallo-depent_PP-like | PFAM:PF00149 | PFAM:PF16891 | PRINTS:PR00114 | ScanProsite:PS00125 | PANTHER:PTHR11668 |
| PANTHER:PTHR11668:SF403 | SMART:SM00156 | SUPFAM:SSF56300 | InterPro:STPPase_N | InterPro:Ser/Thr-sp_prot-phosphatase | UniParc:UPI0001984849 |
| ArrayExpress:VIT_13s0019g02410 | EnsemblPlantsGene:VIT_13s0019g02410 | EnsemblPlants:VIT_13s0019g02410.t01 | RefSeq:XP_002282188 | RefSeq:XP_002282188.1 | RefSeq:XP_003633473 |
| RefSeq:XP_003633473.1 | RefSeq:XP_010658517.1 | RefSeq:XP_010658518.1 | RefSeq:XP_019079851.1 | : | : |
Description
Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:F6HNT3]
Coordinates
chr13:-:3663850..3668235
Molecular Weight (calculated)
35640.1 Da
IEP (calculated)
5.236
GRAVY (calculated)
-0.122
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MASHGMDDVV LDDIIRRLLE VRSARPGKQV QLSENEIKQL CVASREIFLQ QSNLLELEAP IKICGDIHGQ YSDLLRLFEY GGFPPHTNYL FLGDYVDRGK
101: QSLETICLLL AFKIKYPENF FLLRGNHECA SINRIYGFYD ECKRRFNVRL WKVFTDCFNC LPVAALIDDK ILCMHGGLSP DLANLDQIRN LTRPTAIPDS
201: GLLCDLLWSD PGRDVKGWGM NDRGVSFTFG PDKVSEFLTK HDLDLVCRAH QVVEDGYEFF ADRQLVTVFS APNYCGEFDN AGAMMIVDED LMCSFQILKP
301: AEKKPKILMS TKM
101: QSLETICLLL AFKIKYPENF FLLRGNHECA SINRIYGFYD ECKRRFNVRL WKVFTDCFNC LPVAALIDDK ILCMHGGLSP DLANLDQIRN LTRPTAIPDS
201: GLLCDLLWSD PGRDVKGWGM NDRGVSFTFG PDKVSEFLTK HDLDLVCRAH QVVEDGYEFF ADRQLVTVFS APNYCGEFDN AGAMMIVDED LMCSFQILKP
301: AEKKPKILMS TKM
001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I
Arabidopsis Description
TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.