Factsheet for VIT_14s0060g01750.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_02s0025g04180.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05580.1	VIT_02s0025g04180.t01	AT5G52200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68493	Soybean	cytosol	87.08	87.35
CDX80617	Canola	cytosol	84.31	85.89
Bra009941.1-P	Field mustard	cytosol	84.0	85.58
AT3G05580.1	Thale cress	cytosol	83.38	85.22
CDX86135	Canola	cytosol	66.46	85.04
CDY25019	Canola	cytosol	82.46	84.28
CDY05560	Canola	cytosol	82.15	83.96
CDY05182	Canola	cytosol	81.85	82.87
CDY27754	Canola	cytosol	81.85	82.87
PGSC0003DMT400063710	Potato	cytosol	80.31	82.86
Solyc01g099860.2.1	Tomato	cytosol, unclear	80.31	82.86
Bra001155.1-P	Field mustard	cytosol	80.92	82.7
CDY18815	Canola	cytosol	80.92	82.7
Bra039424.1-P	Field mustard	cytosol	81.54	82.55
Bra040535.1-P	Field mustard	cytosol	80.62	82.39
AT5G27840.4	Thale cress	cytosol	83.38	82.12
Bra020573.1-P	Field mustard	cytosol	80.92	76.45
VIT_06s0004g05530.t01	Wine grape	cytosol	70.15	75.75
KRG96778	Soybean	nucleus	87.08	75.47
GSMUA_Achr11P...	Banana	cytosol	72.92	75.0
VIT_08s0056g00220.t01	Wine grape	cytosol	68.31	74.75
VIT_13s0019g02410.t01	Wine grape	cytosol	71.38	74.12
GSMUA_Achr2P02240_001	Banana	cytosol	71.69	72.59
CDY40717	Canola	cytosol	81.23	72.53
VIT_02s0025g00480.t01	Wine grape	cytosol	71.08	72.41
TraesCS1B01G128100.1	Wheat	cytosol	72.0	72.0
TraesCS1D01G104400.1	Wheat	cytosol	71.38	71.38
EES02921	Sorghum	cytosol	71.38	71.38
TraesCS1A01G095500.1	Wheat	cytosol	71.38	71.38
Zm00001d037601_P001	Maize	cytosol	65.85	71.33
VIT_05s0049g00890.t01	Wine grape	cytosol	71.08	70.86
Os01t0349400-01	Rice	cytosol	70.77	70.77
CDX74139	Canola	cytosol	81.54	70.48
HORVU1Hr1G022370.5	Barley	cytosol	70.46	70.25
TraesCS3D01G199300.1	Wheat	cytosol	69.85	69.85
GSMUA_Achr8P06590_001	Banana	cytosol	58.46	67.86
Zm00001d009844_P001	Maize	cytosol	70.46	67.75
GSMUA_Achr11P...	Banana	cytosol	72.0	66.29
TraesCS3A01G195500.1	Wheat	cytosol	69.85	65.61
TraesCS3B01G226800.1	Wheat	cytosol	69.85	64.86
VIT_14s0036g00370.t01	Wine grape	cytosol	72.31	64.74
HORVU3Hr1G044550.3	Barley	cytosol	55.08	59.87
Zm00001d009181_P005	Maize	cytosol	59.08	52.17
OQU77459	Sorghum	cytosol	71.08	48.63
VIT_14s0066g02240.t01	Wine grape	cytosol	42.77	45.42
VIT_01s0026g01080.t01	Wine grape	cytosol	41.85	44.44
VIT_19s0090g01290.t01	Wine grape	cytosol	41.54	44.26
VIT_17s0000g05330.t01	Wine grape	cytosol	41.54	44.12
VIT_06s0004g00830.t01	Wine grape	cytosol	41.85	43.31
VIT_10s0071g00950.t01	Wine grape	cytosol	36.92	39.6
VIT_13s0156g00060.t01	Wine grape	cytosol	41.54	33.92

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100240815	wikigene:100240815	MapMan:18.4.24.1.1	Gene3D:3.60.21.10
EMBL:AM449363	ProteinID:CAN74238	ProteinID:CAN74238.1	ProteinID:CCB61888	ProteinID:CCB61888.1	InterPro:Calcineurin-like_PHP_ApaH
UniProt:F6I4Q1	EMBL:FN596746	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	EntrezGene:LOC100240815	wikigene:LOC100240815	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF262
SMART:SM00156	SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	TIGR:TC58715	UniParc:UPI000210A89B
ArrayExpress:VIT_14s0060g01750	EnsemblPlantsGene:VIT_14s0060g01750	EnsemblPlants:VIT_14s0060g01750.t01	unigene:Vvi.10322	RefSeq:XP_002283253	RefSeq:XP_002283253.1

Description

Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:F6I4Q1]

Coordinates

chr14:-:1437995..1441966

Molecular Weight (calculated)

36726.4 Da

IEP (calculated)

6.172

GRAVY (calculated)

-0.206

Length

325 amino acids

Sequence
(BLAST)

001: MMTMEGMMDK GVLEDIIRRL LDGKGGKQVQ LSEAEIRHLC VNARHVFLSQ PNLLQLHAPI RIAGDIHGQY QDLLRLFEYG GFPPAANYLF LGDYVDRGKQ
101: SLETICLLLA YKIRYPDNFY LLRGNHEDAK INRIYGFYDE CKRRFNVRLW KIFTDCFNCL PVAALIDEKI LCMHGGLSPE LQNLNQIKEI QRPTDVPDSG
201: LLCDLLWSDP DARVDGWADS DRGVSCTFGA DKVAEFLDKN DLDLICRGHQ VVEDGYEFFA KRRLVTIFSA PNYGGEFDNA GALLSVDKDL VCSFEIMKPV
301: DNKASLSGST VPKLNLKKPI KPGKI

Best Arabidopsis Sequence Match ( AT5G27840.1 )
(BLAST)

001: MMTSMEGMVE KGVLDDIIRR LLEGKGGKQV QLSESEIRQL CFNARQIFLS QPNLLDLHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI YLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKVFTDCFNC LPVAALIDEK ILCMHGGLSP DLDNLNQIRE IQRPIEIPDS
201: GLLCDLLWSD PDQKIEGWAD SDRGISCTFG ADKVAEFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDES LVCSFEIMKP
301: APASSSHPLK KVPKMGKS

Arabidopsis Description

TOPP8Calcineurin-like metallo-phosphoesterase superfamily protein [Source:TAIR;Acc:AT5G27840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.