Factsheet for GSMUA_Achr11P25430_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr6P26070_001
GSMUA_Achr9P05730_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05580.1	GSMUA_Achr6P26070_001	AT5G52200.1	21798944
AT3G05580.1	GSMUA_Achr9P05730_001	AT5G52200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P06590_001	Banana	cytosol	68.27	86.07
GSMUA_Achr11P...	Banana	cytosol	73.65	82.28
GSMUA_Achr2P02240_001	Banana	cytosol	73.65	81.0
Os01t0349400-01	Rice	cytosol	71.95	78.15
TraesCS3D01G199300.1	Wheat	cytosol	70.54	76.62
Zm00001d037601_P001	Maize	cytosol	64.59	76.0
EES02921	Sorghum	cytosol	69.97	76.0
TraesCS1B01G128100.1	Wheat	cytosol	69.69	75.69
TraesCS1D01G104400.1	Wheat	cytosol	69.69	75.69
CDY25019	Canola	cytosol	67.99	75.47
TraesCS1A01G095500.1	Wheat	cytosol	69.41	75.38
CDX80617	Canola	cytosol	67.99	75.24
AT3G05580.1	Thale cress	cytosol	67.71	75.16
CDY05560	Canola	cytosol	67.71	75.16
Bra009941.1-P	Field mustard	cytosol	67.71	74.92
HORVU1Hr1G022370.5	Barley	cytosol	69.12	74.85
CDX86135	Canola	cytosol	53.54	74.41
PGSC0003DMT400063710	Potato	cytosol	66.29	74.29
Solyc01g099860.2.1	Tomato	cytosol, unclear	66.29	74.29
Bra001155.1-P	Field mustard	cytosol	66.86	74.21
CDY27754	Canola	cytosol	67.42	74.14
CDY05182	Canola	cytosol	67.42	74.14
Bra039424.1-P	Field mustard	cytosol	67.42	74.14
KRH68493	Soybean	cytosol	67.99	74.07
Bra040535.1-P	Field mustard	cytosol	66.57	73.9
CDY18815	Canola	cytosol	66.57	73.9
TraesCS3A01G195500.1	Wheat	cytosol	71.1	72.54
Zm00001d009844_P001	Maize	cytosol	69.12	72.19
VIT_14s0060g01750.t01	Wine grape	cytosol	66.29	72.0
AT5G27840.4	Thale cress	cytosol	66.86	71.52
TraesCS3B01G226800.1	Wheat	cytosol	70.82	71.43
GSMUA_Achr4P09690_001	Banana	cytosol	62.04	71.1
Bra020573.1-P	Field mustard	cytosol	68.27	70.06
GSMUA_Achr8P19510_001	Banana	cytosol	55.24	69.89
GSMUA_Achr8P24570_001	Banana	cytosol	60.34	69.61
GSMUA_Achr2P15380_001	Banana	cytosol	62.89	69.59
GSMUA_Achr4P29300_001	Banana	cytosol	62.61	69.5
GSMUA_Achr10P...	Banana	cytosol	62.89	69.38
GSMUA_Achr2P04120_001	Banana	cytosol	59.49	69.08
GSMUA_Achr4P25210_001	Banana	cytosol	62.04	68.65
GSMUA_Achr11P...	Banana	cytosol	62.89	68.1
GSMUA_Achr1P01390_001	Banana	cytosol	63.17	67.78
HORVU3Hr1G044550.3	Barley	cytosol	56.66	66.89
CDY40717	Canola	cytosol	67.42	65.38
KRG96778	Soybean	nucleus	67.99	64.0
GSMUA_Achr7P10840_001	Banana	cytosol	57.22	63.12
CDX74139	Canola	cytosol	67.14	63.03
Zm00001d009181_P005	Maize	cytosol	58.07	55.71
OQU77459	Sorghum	cytosol	69.69	51.79
GSMUA_Achr4P31160_001	Banana	cytosol	63.17	51.5
GSMUA_Achr7P06210_001	Banana	cytosol	40.23	46.71
GSMUA_Achr9P11070_001	Banana	cytosol	37.96	45.89
GSMUA_Achr7P23950_001	Banana	cytosol	39.66	45.75
GSMUA_Achr1P11730_001	Banana	cytosol	39.09	45.1
GSMUA_Achr1P09340_001	Banana	cytosol	38.81	44.92
GSMUA_Achr2P12450_001	Banana	cytosol	39.66	44.59
GSMUA_Achr4P28610_001	Banana	cytosol	39.38	44.27
GSMUA_Achr8P15360_001	Banana	cytosol	38.81	42.55
GSMUA_AchrUn_...	Banana	cytosol	36.26	42.24
GSMUA_Achr9P21520_001	Banana	cytosol	35.69	41.72
GSMUA_Achr4P22190_001	Banana	cytosol	27.76	38.43
GSMUA_Achr3P20430_001	Banana	plastid	37.11	37.11
GSMUA_AchrUn_...	Banana	cytosol	40.23	29.96

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr11G25430_001
EnsemblPlants:GSMUA_Achr11P25430_001	EnsemblPlants:GSMUA_Achr11T25430_001	InterPro:IPR029052	UniProt:M0RVC3	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF262	SMART:SM00156
SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000296D777	:	:

Description

Serine/threonine-protein phosphatase PP1 isozyme 9 [Source:GMGC_GENE;Acc:GSMUA_Achr11G25430_001]

Coordinates

chr11:-:24565021..24568766

Molecular Weight (calculated)

40335.9 Da

IEP (calculated)

6.572

GRAVY (calculated)

-0.154

Length

353 amino acids

Sequence
(BLAST)

001: MLMTKSSMGA MEGPVLDDVI HRLLEGRQGG RQVQLSESEI RQLCIEAKHV FRAQPNLLEL HAPIKICGDI HGQYLDLLKL FEKGGFPPHS TYLFLGDYVD
101: RGKQSLETIC LLLAYKVKYP DKIFLLRGNH EDAKINRVYG FYDECKRRFN VRLWKTFCDS FNYLPMAALI DKKILCMHGG LSPELNSLDQ IRDIKRPTEI
201: PDYGLLCDLL WSDPDPKIQG WGESDRGVSV TFGADKLAEF LDQHELDLIC RGHQVVEDGY EFFANRRLVT LFSAPNYCGE FDNAGALLSI DKNLFCSFEI
301: LKPYDFMSTP GSSNALKTAP KKHCCYFGDN NVKLYIITLF GFLVIEYCLH FLK

Best Arabidopsis Sequence Match ( AT3G05580.1 )
(BLAST)

001: MMTSMEGMME MGVLDDIIRR LLEGKGGKQV QLSEVEIRQL CVNARQIFLS QPNLLELHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVAALIDEK ILCMHGGLSP ELENLGQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKNEGWTD SDRGISCTFG ADVVADFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APASSTNPLK KVPKMGKS

Arabidopsis Description

TOPP9Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VKY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.