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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY00518
CDY31914
CDY32592
CDY38907

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G05580.1 CDY00518 AT5G52200.1 21798944
AT3G05580.1 CDY31914 AT5G52200.1 21798944
AT3G05580.1 CDY32592 AT5G52200.1 21798944
AT3G05580.1 CDY38907 AT5G52200.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra040535.1-P Field mustard cytosol 99.06 99.06
CDY27754 Canola cytosol 96.23 95.33
CDY05182 Canola cytosol 95.91 95.02
AT3G05580.1 Thale cress cytosol 93.08 93.08
CDY25019 Canola cytosol 90.57 90.57
CDY05560 Canola cytosol 90.25 90.25
CDX80617 Canola cytosol 90.25 89.97
CDX86135 Canola cytosol 71.7 89.76
KRH68493 Soybean cytosol 86.79 85.19
CDY40717 Canola cytosol 97.17 84.89
Solyc01g099860.2.1 Tomato cytosol, unclear 83.02 83.81
PGSC0003DMT400063710 Potato cytosol 83.02 83.81
CDX74139 Canola cytosol 97.48 82.45
VIT_14s0060g01750.t01 Wine grape cytosol 82.7 80.92
CDY71651 Canola cytosol 53.77 77.38
GSMUA_Achr11P... Banana cytosol 73.58 74.05
KRG96778 Soybean nucleus 86.79 73.6
CDX88683 Canola cytosol 71.38 73.46
CDX71136 Canola cytosol 70.75 72.82
CDY32662 Canola cytosol 71.38 72.76
Os01t0349400-01 Rice cytosol 74.21 72.62
CDY10577 Canola cytosol 66.35 72.51
EES02921 Sorghum cytosol 73.9 72.31
CDY20490 Canola cytosol 71.38 72.29
CDY61002 Canola cytosol 72.01 72.01
Zm00001d037601_P001 Maize cytosol 67.92 72.0
CDY33013 Canola cytosol 69.18 71.9
CDY24946 Canola cytosol 71.7 71.7
TraesCS1D01G104400.1 Wheat cytosol 73.27 71.69
TraesCS1B01G128100.1 Wheat cytosol 73.27 71.69
TraesCS1A01G095500.1 Wheat cytosol 73.27 71.69
GSMUA_Achr2P02240_001 Banana cytosol 72.33 71.65
CDY40180 Canola cytosol 71.38 71.61
CDX80301 Canola cytosol 68.87 71.57
CDX83308 Canola cytosol 71.38 71.38
HORVU1Hr1G022370.5 Barley cytosol 72.96 71.17
CDY45437 Canola cytosol 71.07 70.85
CDX95749 Canola cytosol 71.07 70.62
CDY02866 Canola cytosol 71.38 70.28
GSMUA_Achr8P06590_001 Banana cytosol 61.32 69.64
TraesCS3D01G199300.1 Wheat cytosol 71.07 69.54
Zm00001d009844_P001 Maize cytosol 73.58 69.23
CDY25556 Canola cytosol 69.81 69.16
CDX86100 Canola cytosol 66.35 68.95
CDY34395 Canola cytosol 69.5 68.85
CDX86799 Canola cytosol 68.87 68.44
CDY13242 Canola cytosol 68.55 68.12
CDX90793 Canola cytosol 67.61 66.77
GSMUA_Achr11P... Banana cytosol 73.9 66.57
CDY22350 Canola cytosol 69.18 66.47
CDY05136 Canola cytosol 67.3 66.46
CDY60901 Canola cytosol 68.87 66.16
TraesCS3A01G195500.1 Wheat cytosol 71.07 65.32
TraesCS3B01G226800.1 Wheat cytosol 71.07 64.57
HORVU3Hr1G044550.3 Barley cytosol 55.97 59.53
Zm00001d009181_P005 Maize cytosol 60.69 52.45
OQU77459 Sorghum cytosol 73.9 49.47
CDY38778 Canola cytosol 43.08 44.77
CDY11632 Canola cytosol 42.77 44.44
CDY14840 Canola cytosol 43.71 44.41
CDY47976 Canola cytosol 43.71 44.41
CDY51518 Canola cytosol 43.71 44.41
CDY55398 Canola cytosol 43.71 44.41
CDY69521 Canola cytosol 43.71 44.41
CDY34892 Canola cytosol 42.45 44.12
CDY07799 Canola cytosol 42.45 44.12
CDY66916 Canola cytosol 43.4 44.09
CDY46683 Canola cytosol 42.14 43.93
CDX92800 Canola cytosol 42.14 43.93
CDX93426 Canola cytosol 42.14 43.79
CDY37977 Canola cytosol 42.14 43.79
CDY00569 Canola cytosol 43.08 43.77
CDX88988 Canola cytosol 43.08 43.77
CDY06035 Canola cytosol 43.08 43.77
CDX98300 Canola cytosol 43.08 43.77
CDX71949 Canola cytosol 43.08 43.77
CDX94291 Canola cytosol 41.82 43.61
CDX89309 Canola cytosol 41.82 43.61
CDY30909 Canola cytosol 41.82 43.46
CDY52461 Canola cytosol 41.82 43.46
CDY45151 Canola cytosol 41.82 43.46
CDY24572 Canola cytosol 39.62 41.58
CDY25366 Canola cytosol 39.62 41.58
CDY70204 Canola cytosol 39.62 41.58
CDX82268 Canola cytosol 39.31 41.25
CDY33438 Canola cytosol 39.31 41.25
CDX67746 Canola cytosol 26.1 40.89
CDY69052 Canola cytosol 39.62 40.13
CDY03595 Canola cytosol 39.31 37.76
CDY36067 Canola plasma membrane 39.62 17.17
CDX89311 Canola cytosol, plastid 27.36 12.61
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.1.1Gene3D:3.60.21.10GO:A0A078FWK5UniProt:A0A078FWK5
EnsemblPlants:CDY18815ProteinID:CDY18815ProteinID:CDY18815.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824
GO:GO:0004721GO:GO:0005488GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00005982001InterPro:IPR029052
InterPro:Metallo-depent_PP-likePFAM:PF00149PFAM:PF16891PRINTS:PR00114ScanProsite:PS00125PANTHER:PTHR11668
PANTHER:PTHR11668:SF262SMART:SM00156SUPFAM:SSF56300InterPro:STPPase_NInterPro:Ser/Thr-sp_prot-phosphataseUniParc:UPI0004EE834D
Description
BnaAnng02800DSerine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A078FWK5]
Coordinates
chrLK032089:+:317225..318609
Molecular Weight (calculated)
36053.5 Da
IEP (calculated)
5.109
GRAVY (calculated)
-0.184
Length
318 amino acids
Sequence
(BLAST)
001: MTTTMEAVME ISMVDDIIRR LLEGKGGKQV QLSEIEIRQL CVNARQIFLN QPNLLDLHAP IRICGDIHGQ YQDLLRLFEY GGYPPSAHYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVSALIDDK ILCMHGGLSP DLENLEQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKSEGWSD SDRGISCTFG ADVVAEFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APSSSGIPLK KVPKMGKS
Best Arabidopsis Sequence Match ( AT3G05580.1 )
(BLAST)
001: MMTSMEGMME MGVLDDIIRR LLEGKGGKQV QLSEVEIRQL CVNARQIFLS QPNLLELHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVAALIDEK ILCMHGGLSP ELENLGQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKNEGWTD SDRGISCTFG ADVVADFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APASSTNPLK KVPKMGKS
Arabidopsis Description
TOPP9Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VKY6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.