CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX67659
CDX72108
CDX76014
CDY27189
CDY47381
CDY51261

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G19980.1	CDX67659	AT3G56850.1	23404889
AT3G19980.1	CDX72108	AT3G56850.1	23404889
AT3G19980.1	CDX76014	AT3G56850.1	23404889
AT3G19980.1	CDY27189	AT3G56850.1	23404889
AT3G19980.1	CDY47381	AT3G56850.1	23404889
AT3G19980.1	CDY51261	AT3G56850.1	23404889

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038247.1-P	Field mustard	cytosol	100.0	100.0
CDY33438	Canola	cytosol	99.34	99.34
CDY25366	Canola	cytosol	98.02	98.02
CDX82268	Canola	cytosol	98.02	98.02
CDY24572	Canola	cytosol	97.36	97.36
AT3G19980.1	Thale cress	cytosol	96.7	96.7
PGSC0003DMT400039336	Potato	cytosol	95.38	95.38
KRH36174	Soybean	cytosol, nucleus	95.38	95.38
Solyc06g072140.2.1	Tomato	cytosol	95.05	95.05
VIT_10s0071g00950.t01	Wine grape	cytosol	95.05	95.05
Solyc03g019900.2.1	Tomato	cytosol	95.05	95.05
KRH36176	Soybean	cytosol	95.05	95.05
KRG90576	Soybean	cytosol, nucleus	95.05	95.05
GSMUA_Achr9P21520_001	Banana	cytosol	93.73	94.04
GSMUA_AchrUn_...	Banana	cytosol	93.73	93.73
TraesCS3A01G261200.1	Wheat	cytosol	92.74	92.74
HORVU3Hr1G064290.2	Barley	cytosol	92.74	92.74
TraesCS3D01G261300.1	Wheat	cytosol	92.74	92.74
TraesCS3B01G294200.1	Wheat	cytosol, golgi, plastid	92.74	92.74
Os01t0691700-01	Rice	cytosol, plasma membrane	92.08	92.08
CDY69052	Canola	cytosol	95.38	92.04
EES01303	Sorghum	cytosol	91.42	91.42
Zm00001d011634_P003	Maize	cytosol	91.42	91.42
TraesCS1D01G380200.1	Wheat	cytosol	90.1	90.1
CDY03595	Canola	cytosol	95.38	87.31
PGSC0003DMT400069607	Potato	cytosol	94.72	85.67
KRH40922	Soybean	cytosol	86.8	85.67
TraesCS1B01G393500.1	Wheat	cytosol	86.14	85.57
HORVU1Hr1G083000.1	Barley	cytosol	90.43	76.75
TraesCS1A01G373300.1	Wheat	cytosol	89.44	75.7
CDY46683	Canola	cytosol	60.07	59.67
CDX92800	Canola	cytosol	60.07	59.67
CDX89309	Canola	cytosol	59.74	59.34
CDX94291	Canola	cytosol	59.74	59.34
CDY37977	Canola	cytosol	57.76	57.19
CDX93426	Canola	cytosol	57.76	57.19
CDY34892	Canola	cytosol	56.77	56.21
CDY11632	Canola	cytosol	56.77	56.21
CDY52461	Canola	cytosol	56.77	56.21
CDY07799	Canola	cytosol	56.77	56.21
CDY38778	Canola	cytosol	56.77	56.21
CDY30909	Canola	cytosol	56.11	55.56
CDY45151	Canola	cytosol	56.11	55.56
CDY14840	Canola	cytosol	57.1	55.27
CDY47976	Canola	cytosol	57.1	55.27
CDX88988	Canola	cytosol	56.77	54.95
CDY00569	Canola	cytosol	56.77	54.95
CDX98300	Canola	cytosol	56.77	54.95
CDY06035	Canola	cytosol	56.77	54.95
CDX71949	Canola	cytosol	56.77	54.95
CDY51518	Canola	cytosol	56.44	54.63
CDY55398	Canola	cytosol	56.44	54.63
CDY66916	Canola	cytosol	56.44	54.63
CDY69521	Canola	cytosol	56.44	54.63
CDX67746	Canola	cytosol	33.33	49.75
CDY71651	Canola	cytosol	32.01	43.89
CDX86135	Canola	cytosol	34.98	41.73
CDX83308	Canola	cytosol	42.57	40.57
CDY36067	Canola	plasma membrane	98.02	40.46
CDX71136	Canola	cytosol	41.25	40.45
CDX80301	Canola	cytosol	40.59	40.2
CDX95749	Canola	cytosol	42.24	40.0
CDY33013	Canola	cytosol	40.26	39.87
CDX80617	Canola	cytosol	41.91	39.81
CDX88683	Canola	cytosol	40.59	39.81
CDY24946	Canola	cytosol	41.58	39.62
CDY05560	Canola	cytosol	41.58	39.62
CDY18815	Canola	cytosol	41.58	39.62
CDY61002	Canola	cytosol	41.58	39.62
CDY20490	Canola	cytosol	40.92	39.49
CDY32662	Canola	cytosol	40.59	39.42
CDY25019	Canola	cytosol	41.25	39.31
CDY10577	Canola	cytosol	37.62	39.18
CDY45437	Canola	cytosol	40.92	38.87
CDY40180	Canola	cytosol	40.59	38.8
CDY22350	Canola	cytosol	42.24	38.67
CDY27754	Canola	cytosol	40.92	38.63
CDY05182	Canola	cytosol	40.92	38.63
CDX90793	Canola	cytosol	40.92	38.51
CDX86799	Canola	cytosol	40.59	38.44
CDY13242	Canola	cytosol	40.59	38.44
CDX86100	Canola	cytosol	38.61	38.24
CDY02866	Canola	cytosol	40.59	38.08
CDY60901	Canola	cytosol	41.58	38.07
CDY05136	Canola	cytosol	40.26	37.89
CDY34395	Canola	cytosol	39.27	37.07
CDY25556	Canola	cytosol	39.27	37.07
CDY40717	Canola	cytosol	40.92	34.07
CDX74139	Canola	cytosol	41.58	33.51
CDX89311	Canola	cytosol, plastid	21.78	9.57

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.5	Gene3D:3.60.21.10	GO:A0A078JTQ0	UniProt:A0A078JTQ0
EnsemblPlants:CDY70204	ProteinID:CDY70204	ProteinID:CDY70204.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00097097001	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF400	SMART:SM00156	SUPFAM:SSF56300
InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0002544AC1	:	:	:	:

Description

BnaAnng32970DSerine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A078JTQ0]

Coordinates

chrLK041458:+:154..3227

Molecular Weight (calculated)

34892.4 Da

IEP (calculated)

4.785

GRAVY (calculated)

-0.332

Length

303 amino acids

Sequence
(BLAST)

001: MDLDQWISKV KDGQHLSEEE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARH
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGRVLCVH GGLSPDVRTI DQIRLVDRNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFDENMERDV KYFNETEENN QMRGPRTGVP
301: YFL

Best Arabidopsis Sequence Match ( AT3G19980.1 )
(BLAST)

001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL

Arabidopsis Description

FYPP3Phytochrome-associated serine/threonine-protein phosphatase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.