Factsheet for Solyc06g072140.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc08g078700.2.1
Solyc10g076920.1.1
Solyc10g081350.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50370.1	Solyc10g076920.1.1	AT3G56850.1	23404889
AT1G50370.1	Solyc10g081350.1.1	AT3G56850.1	23404889
AT1G50370.1	Solyc08g078700.2.1	AT4G25200.1	21798944
AT3G19980.1	Solyc10g076920.1.1	AT3G56850.1	23404889
AT3G19980.1	Solyc10g081350.1.1	AT3G56850.1	23404889

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0071g00950.t01	Wine grape	cytosol	97.69	97.69
Solyc03g019900.2.1	Tomato	cytosol	97.69	97.69
KRG90576	Soybean	cytosol, nucleus	97.69	97.69
KRH36174	Soybean	cytosol, nucleus	97.36	97.36
AT3G19980.1	Thale cress	cytosol	97.03	97.03
KRH36176	Soybean	cytosol	97.03	97.03
GSMUA_AchrUn_...	Banana	cytosol	97.03	97.03
GSMUA_Achr9P21520_001	Banana	cytosol	96.7	97.02
AT1G50370.1	Thale cress	cytosol	96.7	96.7
CDY25366	Canola	cytosol	95.38	95.38
Os01t0691700-01	Rice	cytosol, plasma membrane	95.05	95.05
CDY70204	Canola	cytosol	95.05	95.05
CDY33438	Canola	cytosol	95.05	95.05
Bra038247.1-P	Field mustard	cytosol	95.05	95.05
CDY24572	Canola	cytosol	94.72	94.72
TraesCS3D01G261300.1	Wheat	cytosol	94.72	94.72
HORVU3Hr1G064290.2	Barley	cytosol	94.72	94.72
TraesCS3B01G294200.1	Wheat	cytosol, golgi, plastid	94.72	94.72
TraesCS3A01G261200.1	Wheat	cytosol	94.72	94.72
Bra027930.1-P	Field mustard	cytosol	58.42	94.65
Bra001770.1-P	Field mustard	cytosol	94.39	94.39
CDX82268	Canola	cytosol	94.39	94.39
Zm00001d011634_P003	Maize	cytosol	93.07	93.07
EES01303	Sorghum	cytosol	93.07	93.07
TraesCS1D01G380200.1	Wheat	cytosol	91.75	91.75
CDY69052	Canola	cytosol	95.05	91.72
PGSC0003DMT400069607	Potato	cytosol	99.67	90.15
KRH40922	Soybean	cytosol	89.11	87.95
CDY03595	Canola	cytosol	95.05	87.01
TraesCS1B01G393500.1	Wheat	cytosol	87.46	86.89
Bra035830.1-P	Field mustard	cytosol	94.72	85.16
Bra014246.1-P	Field mustard	cytosol	95.38	83.29
HORVU1Hr1G083000.1	Barley	cytosol	92.08	78.15
TraesCS1A01G373300.1	Wheat	cytosol	91.09	77.09
Solyc07g065020.2.1	Tomato	cytosol	59.74	59.34
Solyc05g006590.2.1	Tomato	cytosol	56.44	55.88
Solyc01g011340.2.1	Tomato	cytosol, plastid	56.44	55.88
Solyc01g034020.2.1	Tomato	cytosol	55.12	54.58
Solyc01g073650.2.1	Tomato	cytosol	54.79	53.21
Solyc01g005950.2.1	Tomato	cytosol, extracellular	54.79	53.04
Solyc06g030490.2.1	Tomato	cytosol	40.92	40.79
Solyc01g099860.2.1	Tomato	cytosol, unclear	41.58	40.0
Solyc06g076430.2.1	Tomato	cytosol, nucleus	40.59	39.68
CDY36067	Canola	plasma membrane	94.39	38.96
Solyc06g053630.2.1	Tomato	cytosol	41.25	38.82
Solyc06g005800.2.1	Tomato	cytosol, nucleus	40.59	38.56
Solyc05g055060.2.1	Tomato	cytosol, nucleus	41.25	38.46
Solyc09g090060.2.1	Tomato	cytosol	40.26	36.97

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.5	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052	UniProt:K4C8T6	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF400	SMART:SM00156
SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	EnsemblPlantsGene:Solyc06g072140.2	EnsemblPlants:Solyc06g072140.2.1	UniParc:UPI0002765589	:

Description

Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:K4C8T6]

Coordinates

chr6:+:44463694..44469962

Molecular Weight (calculated)

34882.5 Da

IEP (calculated)

4.789

GRAVY (calculated)

-0.279

Length

303 amino acids

Sequence
(BLAST)

001: MDLDQWITKV KEGQHLAEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFHTGGHVPE TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRVIDRNC EIPHEGPFCD LMWSDPEEIE
201: TWAVSPRGAG WLFGSRVTTE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNENMEREV KFFTETEENN QMRGPRTGVP
301: YFL

Best Arabidopsis Sequence Match ( AT3G19980.1 )
(BLAST)

001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL

Arabidopsis Description

FYPP3Phytochrome-associated serine/threonine-protein phosphatase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.