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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67659
CDX72108
CDX76014
CDY27189
CDY47381
CDY51261

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G19980.1 CDX67659 AT3G56850.1 23404889
AT3G19980.1 CDX72108 AT3G56850.1 23404889
AT3G19980.1 CDX76014 AT3G56850.1 23404889
AT3G19980.1 CDY27189 AT3G56850.1 23404889
AT3G19980.1 CDY47381 AT3G56850.1 23404889
AT3G19980.1 CDY51261 AT3G56850.1 23404889
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY24572 Canola cytosol 99.34 99.34
CDY33438 Canola cytosol 98.02 98.02
CDY70204 Canola cytosol 98.02 98.02
AT3G19980.1 Thale cress cytosol 97.69 97.69
CDX82268 Canola cytosol 97.36 97.36
KRH36174 Soybean cytosol, nucleus 95.71 95.71
VIT_10s0071g00950.t01 Wine grape cytosol 95.38 95.38
Solyc06g072140.2.1 Tomato cytosol 95.38 95.38
PGSC0003DMT400039336 Potato cytosol 95.38 95.38
KRH36176 Soybean cytosol 95.38 95.38
KRG90576 Soybean cytosol, nucleus 95.38 95.38
Solyc03g019900.2.1 Tomato cytosol 95.05 95.05
GSMUA_AchrUn_... Banana cytosol 94.06 94.06
GSMUA_Achr9P21520_001 Banana cytosol 93.73 94.04
CDY69052 Canola cytosol 96.04 92.68
TraesCS3B01G294200.1 Wheat cytosol, golgi, plastid 92.41 92.41
HORVU3Hr1G064290.2 Barley cytosol 92.41 92.41
TraesCS3A01G261200.1 Wheat cytosol 92.41 92.41
TraesCS3D01G261300.1 Wheat cytosol 92.41 92.41
Os01t0691700-01 Rice cytosol, plasma membrane 92.08 92.08
EES01303 Sorghum cytosol 90.76 90.76
Zm00001d011634_P003 Maize cytosol 90.76 90.76
TraesCS1D01G380200.1 Wheat cytosol 89.77 89.77
Bra035830.1-P Field mustard cytosol 99.34 89.32
CDY03595 Canola cytosol 96.04 87.92
PGSC0003DMT400069607 Potato cytosol 95.05 85.97
KRH40922 Soybean cytosol 86.8 85.67
TraesCS1B01G393500.1 Wheat cytosol 85.48 84.92
HORVU1Hr1G083000.1 Barley cytosol 90.1 76.47
TraesCS1A01G373300.1 Wheat cytosol 89.11 75.42
CDX92800 Canola cytosol 60.07 59.67
CDY46683 Canola cytosol 60.07 59.67
CDX89309 Canola cytosol 59.74 59.34
CDX94291 Canola cytosol 59.74 59.34
CDX93426 Canola cytosol 57.1 56.54
CDY37977 Canola cytosol 57.1 56.54
CDY47976 Canola cytosol 57.76 55.91
CDY14840 Canola cytosol 57.76 55.91
CDY07799 Canola cytosol 56.44 55.88
CDY11632 Canola cytosol 56.44 55.88
CDY52461 Canola cytosol 56.44 55.88
CDY38778 Canola cytosol 56.44 55.88
CDY34892 Canola cytosol 56.44 55.88
CDY00569 Canola cytosol 57.1 55.27
CDX71949 Canola cytosol 57.1 55.27
CDY06035 Canola cytosol 57.1 55.27
CDX88988 Canola cytosol 57.1 55.27
CDY69521 Canola cytosol 57.1 55.27
CDY66916 Canola cytosol 57.1 55.27
CDX98300 Canola cytosol 57.1 55.27
CDY30909 Canola cytosol 55.78 55.23
CDY45151 Canola cytosol 55.78 55.23
CDY55398 Canola cytosol 56.77 54.95
CDY51518 Canola cytosol 56.77 54.95
CDX67746 Canola cytosol 33.33 49.75
CDY71651 Canola cytosol 31.68 43.44
CDX86135 Canola cytosol 34.65 41.34
CDY36067 Canola plasma membrane 97.36 40.19
CDX71136 Canola cytosol 40.92 40.13
CDX83308 Canola cytosol 41.91 39.94
CDY18815 Canola cytosol 41.58 39.62
CDX80301 Canola cytosol 39.93 39.54
CDX80617 Canola cytosol 41.58 39.5
CDX88683 Canola cytosol 40.26 39.48
CDX95749 Canola cytosol 41.58 39.38
CDY05560 Canola cytosol 41.25 39.31
CDY61002 Canola cytosol 41.25 39.31
CDY24946 Canola cytosol 41.25 39.31
CDY33013 Canola cytosol 39.6 39.22
CDY20490 Canola cytosol 40.59 39.17
CDY32662 Canola cytosol 40.26 39.1
CDY25019 Canola cytosol 40.92 38.99
CDY10577 Canola cytosol 37.29 38.83
CDX90793 Canola cytosol 41.25 38.82
CDY13242 Canola cytosol 40.92 38.75
CDX86799 Canola cytosol 40.92 38.75
CDY27754 Canola cytosol 40.92 38.63
CDY05182 Canola cytosol 40.92 38.63
CDY45437 Canola cytosol 40.26 38.24
CDY05136 Canola cytosol 40.59 38.2
CDY40180 Canola cytosol 39.93 38.17
CDY22350 Canola cytosol 41.58 38.07
CDX86100 Canola cytosol 38.28 37.91
CDY02866 Canola cytosol 40.26 37.77
CDY25556 Canola cytosol 39.93 37.69
CDY34395 Canola cytosol 39.93 37.69
CDY60901 Canola cytosol 40.92 37.46
CDY40717 Canola cytosol 40.92 34.07
CDX74139 Canola cytosol 41.58 33.51
CDX89311 Canola cytosol, plastid 22.11 9.71
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.1.5Gene3D:3.60.21.10GO:A0A078GIZ9UniProt:A0A078GIZ9
EnsemblPlants:CDY25366ProteinID:CDY25366ProteinID:CDY25366.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824
GO:GO:0004721GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016787GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00029488001InterPro:IPR029052InterPro:Metallo-depent_PP-likePFAM:PF00149
PRINTS:PR00114ScanProsite:PS00125PANTHER:PTHR11668PANTHER:PTHR11668:SF24SMART:SM00156SUPFAM:SSF56300
InterPro:Ser/Thr-sp_prot-phosphataseUniParc:UPI0004EDE799::::
Description
BnaA05g19180DSerine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A078GIZ9]
Coordinates
chrLK032174:+:292802..296197
Molecular Weight (calculated)
34740.2 Da
IEP (calculated)
4.767
GRAVY (calculated)
-0.300
Length
303 amino acids
Sequence
(BLAST)
001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARH
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLVDRNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFDDNMEKSV KYFTETEENN QMRGPRTGVP
301: YFL
Best Arabidopsis Sequence Match ( AT3G19980.1 )
(BLAST)
001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL
Arabidopsis Description
FYPP3Phytochrome-associated serine/threonine-protein phosphatase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHE7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.