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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX69038
CDX69649
CDX72207
CDX81207
CDX81375
CDX81376
CDY09785
CDY18334
CDY24187
CDY31896

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G11240.1 CDX69038 AT5G13310.1 21798944
AT4G11240.1 CDX69649 AT5G13310.1 21798944
AT4G11240.1 CDX72207 AT5G13310.1 21798944
AT4G11240.1 CDX81207 AT5G13310.1 21798944
AT4G11240.1 CDX81375 AT5G13310.1 21798944
AT4G11240.1 CDX81376 AT5G13310.1 21798944
AT4G11240.1 CDY09785 AT5G13310.1 21798944
AT4G11240.1 CDY18334 AT5G13310.1 21798944
AT4G11240.1 CDY24187 AT5G13310.1 21798944
AT4G11240.1 CDY31896 AT5G13310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra000740.1-P Field mustard cytosol 99.38 99.69
CDY05136 Canola cytosol 99.07 99.07
CDY13242 Canola cytosol 92.86 93.44
CDX86799 Canola cytosol 92.24 92.81
AT4G11240.1 Thale cress cytosol 88.82 88.82
KRH59977 Soybean nucleus 82.92 83.18
KRH41246 Soybean nucleus 82.92 83.18
VIT_02s0025g00480.t01 Wine grape cytosol 81.68 82.45
GSMUA_Achr2P15380_001 Banana cytosol 80.75 81.5
CDY71651 Canola cytosol 54.35 79.19
CDY25556 Canola cytosol 78.26 78.5
CDY34395 Canola cytosol 78.26 78.5
GSMUA_Achr10P... Banana cytosol 77.95 78.44
HORVU7Hr1G026400.1 Barley cytosol 77.64 77.88
Os06t0164100-02 Rice cytosol, nucleus, plasma membrane 77.64 77.64
TraesCS7D01G124400.1 Wheat cytosol 77.33 77.57
TraesCS7B01G025800.1 Wheat cytosol 77.33 77.57
TraesCS7A01G126500.1 Wheat cytosol 77.33 77.57
EER89259 Sorghum cytosol 77.33 76.85
Zm00001d036285_P001 Maize cytosol, extracellular 76.71 76.23
CDX88683 Canola cytosol 72.98 76.05
CDX71136 Canola cytosol 72.98 76.05
CDY32662 Canola cytosol 73.6 75.96
Zm00001d045213_P004 Maize cytosol 76.09 75.62
CDY33013 Canola cytosol 71.74 75.49
CDX80301 Canola cytosol 71.43 75.16
CDX83308 Canola cytosol 73.29 74.21
CDY61002 Canola cytosol 72.98 73.9
CDY40180 Canola cytosol 72.67 73.82
CDY02866 Canola cytosol 73.91 73.68
CDY24946 Canola cytosol 72.67 73.58
CDX86100 Canola cytosol 69.88 73.53
CDX95749 Canola cytosol 72.98 73.44
CDY20490 Canola cytosol 71.43 73.25
CDY10577 Canola cytosol 66.15 73.2
CDY45437 Canola cytosol 72.36 73.04
GSMUA_Achr7P10840_001 Banana cytosol 69.88 70.31
CDY60901 Canola cytosol 71.12 69.18
CDY22350 Canola cytosol 71.12 69.18
CDX86135 Canola cytosol 53.42 67.72
CDX80617 Canola cytosol 67.08 67.71
CDY25019 Canola cytosol 66.77 67.61
CDY18815 Canola cytosol 66.77 67.61
CDY27754 Canola cytosol 67.39 67.6
CDY05182 Canola cytosol 67.39 67.6
CDY05560 Canola cytosol 66.46 67.3
CDY40717 Canola cytosol 67.08 59.34
GSMUA_Achr4P31160_001 Banana cytosol 79.5 59.12
CDX74139 Canola cytosol 66.77 57.18
CDY51518 Canola cytosol 43.17 44.41
CDY55398 Canola cytosol 43.17 44.41
CDY69521 Canola cytosol 43.17 44.41
CDY38778 Canola cytosol 41.93 44.12
CDY11632 Canola cytosol 41.93 44.12
CDY66916 Canola cytosol 42.86 44.09
CDY14840 Canola cytosol 42.86 44.09
CDY47976 Canola cytosol 42.86 44.09
CDY52461 Canola cytosol 41.61 43.79
CDX93426 Canola cytosol 41.3 43.46
CDY45151 Canola cytosol 41.3 43.46
CDY37977 Canola cytosol 41.3 43.46
CDY30909 Canola cytosol 41.3 43.46
CDX71949 Canola cytosol 42.24 43.45
CDX88988 Canola cytosol 42.24 43.45
CDX98300 Canola cytosol 42.24 43.45
CDY06035 Canola cytosol 42.24 43.45
CDY00569 Canola cytosol 42.24 43.45
CDX94291 Canola cytosol 40.99 43.28
CDX92800 Canola cytosol 40.99 43.28
CDX89309 Canola cytosol 40.99 43.28
CDY46683 Canola cytosol 40.99 43.28
CDY07799 Canola cytosol 40.99 43.14
CDY34892 Canola cytosol 40.99 43.14
CDX67746 Canola cytosol 26.09 41.38
CDY24572 Canola cytosol 38.82 41.25
CDY25366 Canola cytosol 38.82 41.25
CDY70204 Canola cytosol 38.51 40.92
CDX82268 Canola cytosol 38.2 40.59
CDY33438 Canola cytosol 38.2 40.59
CDY69052 Canola cytosol 38.82 39.81
CDY03595 Canola cytosol 38.51 37.46
CDY36067 Canola plasma membrane 38.51 16.89
CDX89311 Canola cytosol, plastid 26.4 12.32
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.1.1Gene3D:3.60.21.10GO:A0A078DUB5EnsemblPlants:CDX90793
ProteinID:CDX90793ProteinID:CDX90793.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00151497001InterPro:IPR029052InterPro:Metallo-depent_PP-likePFAM:PF00149PFAM:PF16891PRINTS:PR00114
ScanProsite:PS00125PANTHER:PTHR11668PANTHER:PTHR11668:SF294SMART:SM00156SUPFAM:SSF56300InterPro:STPPase_N
InterPro:Ser/Thr-sp_prot-phosphataseUniParc:UPI0004EE1410SEG:seg:::
Description
BnaA03g24730D
Coordinates
chrLK031864:+:562883..564716
Molecular Weight (calculated)
36415.7 Da
IEP (calculated)
5.462
GRAVY (calculated)
-0.227
Length
322 amino acids
Sequence
(BLAST)
001: MDETLLDDII RRLLETNNGK AGKQVKLLEV EIRQLCYASK EVFLSQPNLL ELEAPIKICA GDVHGQFPDL LRLFEYGGYP PAANYLFLGD YVDRGKQSIE
101: TICLLLAYKL KYKLNFFLLR GNHESASINR VYGFYDECKR KYNVRLWKSF TDCFNCLPVA ALIDDKILCM HGGLSPDLKS LDDIRRIPRP IDVPDQGVLC
201: DLLWADPEKE VKGWGENERG VSYTFGADIV AEFLQTHDLD LVCRAHQVVE DGYEFFANRQ LVTIFSAPNY CGEFDNAGAM MSVDDSLTCS FQIIKSTEKK
301: IRFGFNNVSR PGTPPHKGGR GG
Best Arabidopsis Sequence Match ( AT4G11240.1 )
(BLAST)
001: MDETLLDDII RRLLATNNGR TVKQAQITET EIRQLCLASK EVFLSQPNLL ELEAPIKICG DVHGQFPDLL RLFEYGGYPP AANYLFLGDY VDRGKQSIET
101: ICLLLAYKVK YKFNFFLLRG NHECASINRV YGFYDECKRR YNVRLWKTFT ECFNCLPVSA LIDDKILCMH GGLSPDIKSL DDIRRIPRPI DVPDQGILCD
201: LLWADPDREI QGWGENDRGV SYTFGADKVA EFLQTHDLDL ICRAHQVVED GYEFFAKRQL VTIFSAPNYC GEFDNAGALM SVDDSLTCSF QILKASEKKG
301: RFGFNNNVPR PGTPPHKGGK GR
Arabidopsis Description
TOPP6Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178V1Q1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.