Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13242 | Canola | cytosol | 90.37 | 90.94 |
| CDX86799 | Canola | cytosol | 89.75 | 90.31 |
| Bra035240.1-P | Field mustard | cytosol | 89.75 | 90.31 |
| CDX90793 | Canola | cytosol | 88.82 | 88.82 |
| Bra000740.1-P | Field mustard | cytosol | 88.51 | 88.78 |
| CDY05136 | Canola | cytosol | 87.89 | 87.89 |
| KRH59977 | Soybean | nucleus | 85.09 | 85.36 |
| KRH41246 | Soybean | nucleus | 85.09 | 85.36 |
| VIT_02s0025g00480.t01 | Wine grape | cytosol | 83.85 | 84.64 |
| GSMUA_Achr2P15380_001 | Banana | cytosol | 82.3 | 83.07 |
| AT1G64040.1 | Thale cress | cytosol | 81.37 | 81.37 |
| Os06t0164100-02 | Rice | cytosol, nucleus, plasma membrane | 80.12 | 80.12 |
| GSMUA_Achr10P... | Banana | cytosol | 79.5 | 80.0 |
| Zm00001d045213_P004 | Maize | cytosol | 80.43 | 79.94 |
| Zm00001d036285_P001 | Maize | cytosol, extracellular | 79.81 | 79.32 |
| TraesCS7A01G126500.1 | Wheat | cytosol | 78.57 | 78.82 |
| TraesCS7B01G025800.1 | Wheat | cytosol | 78.57 | 78.82 |
| TraesCS7D01G124400.1 | Wheat | cytosol | 78.57 | 78.82 |
| HORVU7Hr1G026400.1 | Barley | cytosol | 78.26 | 78.5 |
| EER89259 | Sorghum | cytosol | 78.88 | 78.4 |
| AT5G59160.1 | Thale cress | cytosol | 72.36 | 74.68 |
| AT2G29400.1 | Thale cress | cytosol | 72.98 | 73.9 |
| GSMUA_Achr7P10840_001 | Banana | cytosol | 72.36 | 72.81 |
| AT3G46820.1 | Thale cress | cytosol | 70.5 | 72.76 |
| AT2G39840.1 | Thale cress | cytosol | 71.43 | 71.65 |
| AT3G05580.1 | Thale cress | cytosol | 67.7 | 68.55 |
| AT5G43380.1 | Thale cress | cytosol | 68.32 | 66.47 |
| AT5G27840.4 | Thale cress | cytosol | 68.01 | 66.36 |
| GSMUA_Achr4P31160_001 | Banana | cytosol | 83.23 | 61.89 |
| AT2G42500.1 | Thale cress | cytosol | 42.55 | 43.77 |
| AT3G58500.1 | Thale cress | cytosol | 42.24 | 43.45 |
| AT1G69960.1 | Thale cress | cytosol | 40.99 | 43.0 |
| AT1G10430.1 | Thale cress | cytosol | 40.68 | 42.81 |
| AT1G59830.1 | Thale cress | cytosol | 40.68 | 42.81 |
| AT4G26720.1 | Thale cress | cytosol | 40.06 | 42.3 |
| AT3G19980.1 | Thale cress | cytosol | 37.58 | 39.93 |
| AT1G50370.1 | Thale cress | cytosol | 37.27 | 39.6 |
| AT5G55260.2 | Thale cress | cytosol | 42.24 | 39.31 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.1.1 | Gene3D:3.60.21.10 | EntrezGene:826726 | UniProt:A0A178V1Q1 |
| ProteinID:AAC39460.1 | ProteinID:AEE82988.1 | ArrayExpress:AT4G11240 | EnsemblPlantsGene:AT4G11240 | RefSeq:AT4G11240 | TAIR:AT4G11240 |
| RefSeq:AT4G11240-TAIR-G | EnsemblPlants:AT4G11240.1 | TAIR:AT4G11240.1 | EMBL:AY086060 | EMBL:AY090365 | EMBL:AY122904 |
| Unigene:At.3651 | ProteinID:CAB51408.1 | ProteinID:CAB81225.1 | InterPro:Calcineurin-like_PHP_ApaH | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004721 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like |
| RefSeq:NP_567375.1 | ProteinID:OAO99633.1 | UniProt:P48486 | PFAM:PF00149 | PFAM:PF16891 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00114 | ScanProsite:PS00125 | PANTHER:PTHR11668 | PANTHER:PTHR11668:SF294 | SMART:SM00156 | SUPFAM:SSF56300 |
| InterPro:STPPase_N | InterPro:Ser/Thr-sp_prot-phosphatase | Symbol:TOPP7 | UniParc:UPI000009DF6B | EMBL:Z46253 | : |
Description
TOPP6Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178V1Q1]
Coordinates
chr4:+:6847112..6849317
Molecular Weight (calculated)
36568.8 Da
IEP (calculated)
5.986
GRAVY (calculated)
-0.281
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MDETLLDDII RRLLATNNGR TVKQAQITET EIRQLCLASK EVFLSQPNLL ELEAPIKICG DVHGQFPDLL RLFEYGGYPP AANYLFLGDY VDRGKQSIET
101: ICLLLAYKVK YKFNFFLLRG NHECASINRV YGFYDECKRR YNVRLWKTFT ECFNCLPVSA LIDDKILCMH GGLSPDIKSL DDIRRIPRPI DVPDQGILCD
201: LLWADPDREI QGWGENDRGV SYTFGADKVA EFLQTHDLDL ICRAHQVVED GYEFFAKRQL VTIFSAPNYC GEFDNAGALM SVDDSLTCSF QILKASEKKG
301: RFGFNNNVPR PGTPPHKGGK GR
101: ICLLLAYKVK YKFNFFLLRG NHECASINRV YGFYDECKRR YNVRLWKTFT ECFNCLPVSA LIDDKILCMH GGLSPDIKSL DDIRRIPRPI DVPDQGILCD
201: LLWADPDREI QGWGENDRGV SYTFGADKVA EFLQTHDLDL ICRAHQVVED GYEFFAKRQL VTIFSAPNYC GEFDNAGALM SVDDSLTCSF QILKASEKKG
301: RFGFNNNVPR PGTPPHKGGK GR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.