Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G025800.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS7A01G126500.1 | Wheat | cytosol | 100.0 | 100.0 |
| HORVU7Hr1G026400.1 | Barley | cytosol | 98.75 | 98.75 |
| Os06t0164100-02 | Rice | cytosol, nucleus, plasma membrane | 95.64 | 95.34 |
| Zm00001d045213_P004 | Maize | cytosol | 89.1 | 88.27 |
| EER89259 | Sorghum | cytosol | 88.78 | 87.96 |
| Zm00001d036285_P001 | Maize | cytosol, extracellular | 88.47 | 87.65 |
| GSMUA_Achr2P15380_001 | Banana | cytosol | 85.36 | 85.89 |
| GSMUA_Achr10P... | Banana | cytosol | 84.11 | 84.38 |
| VIT_02s0025g00480.t01 | Wine grape | cytosol | 83.18 | 83.7 |
| KRH59977 | Soybean | nucleus | 83.18 | 83.18 |
| KRH41246 | Soybean | nucleus | 83.18 | 83.18 |
| Bra027677.1-P | Field mustard | cytosol | 79.75 | 79.75 |
| CDY25556 | Canola | cytosol | 79.75 | 79.75 |
| CDY34395 | Canola | cytosol | 79.75 | 79.75 |
| CDX86799 | Canola | cytosol | 79.44 | 79.69 |
| Bra035240.1-P | Field mustard | cytosol | 79.44 | 79.69 |
| CDY13242 | Canola | cytosol | 79.13 | 79.38 |
| TraesCS6D01G388000.1 | Wheat | cytosol | 75.08 | 79.28 |
| AT1G64040.1 | Thale cress | cytosol | 79.44 | 79.19 |
| TraesCS4D01G211500.1 | Wheat | cytosol | 79.13 | 79.13 |
| AT4G11240.1 | Thale cress | cytosol | 78.82 | 78.57 |
| CDX90793 | Canola | cytosol | 77.57 | 77.33 |
| Bra000740.1-P | Field mustard | cytosol | 77.26 | 77.26 |
| CDY05136 | Canola | cytosol | 77.26 | 77.02 |
| TraesCS6D01G381300.1 | Wheat | cytosol | 73.83 | 75.0 |
| GSMUA_Achr7P10840_001 | Banana | cytosol | 73.83 | 74.06 |
| TraesCS3D01G199300.1 | Wheat | cytosol | 71.03 | 70.15 |
| TraesCS5D01G549800.1 | Wheat | cytosol | 70.41 | 69.54 |
| TraesCS1D01G104400.1 | Wheat | cytosol | 69.78 | 68.92 |
| GSMUA_Achr4P31160_001 | Banana | cytosol | 84.11 | 62.36 |
| TraesCS7D01G358600.1 | Wheat | cytosol | 41.74 | 43.79 |
| TraesCS6D01G171400.1 | Wheat | cytosol | 41.43 | 43.46 |
| TraesCS5D01G278600.1 | Wheat | cytosol | 39.88 | 43.1 |
| TraesCS5D01G465400.1 | Wheat | golgi | 41.12 | 43.0 |
| TraesCS5D01G180100.1 | Wheat | cytosol | 39.56 | 41.37 |
| TraesCS4D01G282100.1 | Wheat | cytosol | 40.19 | 41.21 |
| TraesCS3D01G261300.1 | Wheat | cytosol | 37.07 | 39.27 |
| TraesCS1D01G380200.1 | Wheat | cytosol | 36.45 | 38.61 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G124400.1 | EnsemblPlantsGene:TraesCS7D01G124400 | Gene3D:3.60.21.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:Calcineurin-like_PHP_ApaH | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like | InterPro:STPPase_N | InterPro:Ser/Thr-sp_prot-phosphatase | KEGG:04658+3.1.3.16 |
| KEGG:04660+3.1.3.16 | PANTHER:PTHR11668 | PANTHER:PTHR11668:SF294 | PFAM:PF00149 | PFAM:PF16891 | PRINTS:PR00114 |
| ScanProsite:PS00125 | SMART:SM00156 | SUPFAM:SSF56300 | TIGR:cd07414 | MapMan:18.4.24.1.1 | : |
Description
No Description!
Coordinates
chr7D:-:78038821..78042015
Molecular Weight (calculated)
36099.3 Da
IEP (calculated)
5.460
GRAVY (calculated)
-0.214
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAAALDDVI RRLLEARGGR TVRPAQLSDA EIRRLCAAAK DVFLSQPNLL ELEAPIKVCG DIHGQYSDLL RLFEYGGFPP EANYLFLGDY VDRGKQSIET
101: ICLLLAYKIK YPENFFLLRG NHECASINRI YGFFDECKRR FNVRLWKVFT DCFNCLPVAA LIDDKILCMH GGLSPDLKNM DQIRNIARPV DIPDHGLLCD
201: LLWSDPDKDV DGWGENDRGV SYTFGADKVA EFLEKHDLDL VCRAHQVVED GYEFFAKRQL VTIFSAPNYC GEFDNAGAMM SIDDSLTCSF QILKPSDKKG
301: KAGTGNSKPG TPPRKIKINI I
101: ICLLLAYKIK YPENFFLLRG NHECASINRI YGFFDECKRR FNVRLWKVFT DCFNCLPVAA LIDDKILCMH GGLSPDLKNM DQIRNIARPV DIPDHGLLCD
201: LLWSDPDKDV DGWGENDRGV SYTFGADKVA EFLEKHDLDL VCRAHQVVED GYEFFAKRQL VTIFSAPNYC GEFDNAGAMM SIDDSLTCSF QILKPSDKKG
301: KAGTGNSKPG TPPRKIKINI I
001: MEDSVVDDVI KRLLGAKNGK TTKQVQLTEA EIKHLCSTAK QIFLTQPNLL ELEAPIKICG DTHGQFSDLL RLFEYGGYPP AANYLFLGDY VDRGKQSVET
101: ICLLLAYKIK YKENFFLLRG NHECASINRI YGFYDECKKR YSVRVWKIFT DCFNCLPVAA LIDEKILCMH GGLSPELKHL DEIRNIPRPA DIPDHGLLCD
201: LLWSDPDKDI EGWGENDRGV SYTFGADKVE EFLQTHDLDL ICRAHQVVED GYEFFANRQL VTIFSAPNYC GEFDNAGAMM SVDDSLTCSF QILKASEKKG
301: NFGFGKNAGR RGTPPRKGGG KG
101: ICLLLAYKIK YKENFFLLRG NHECASINRI YGFYDECKKR YSVRVWKIFT DCFNCLPVAA LIDEKILCMH GGLSPELKHL DEIRNIPRPA DIPDHGLLCD
201: LLWSDPDKDI EGWGENDRGV SYTFGADKVE EFLQTHDLDL ICRAHQVVED GYEFFANRQL VTIFSAPNYC GEFDNAGAMM SVDDSLTCSF QILKASEKKG
301: NFGFGKNAGR RGTPPRKGGG KG
Arabidopsis Description
TOPP3Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178WMA0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.