Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86799 | Canola | cytosol | 98.44 | 98.44 |
| CDX90793 | Canola | cytosol | 93.44 | 92.86 |
| CDY05136 | Canola | cytosol | 93.12 | 92.55 |
| AT4G11240.1 | Thale cress | cytosol | 90.94 | 90.37 |
| VIT_02s0025g00480.t01 | Wine grape | cytosol | 84.69 | 84.95 |
| KRH41246 | Soybean | nucleus | 85.0 | 84.74 |
| KRH59977 | Soybean | nucleus | 84.69 | 84.42 |
| GSMUA_Achr2P15380_001 | Banana | cytosol | 82.81 | 83.07 |
| GSMUA_Achr10P... | Banana | cytosol | 80.62 | 80.62 |
| CDY34395 | Canola | cytosol | 80.62 | 80.37 |
| CDY25556 | Canola | cytosol | 80.62 | 80.37 |
| Os06t0164100-02 | Rice | cytosol, nucleus, plasma membrane | 80.31 | 79.81 |
| HORVU7Hr1G026400.1 | Barley | cytosol | 79.69 | 79.44 |
| CDY71651 | Canola | cytosol | 54.69 | 79.19 |
| TraesCS7D01G124400.1 | Wheat | cytosol | 79.38 | 79.13 |
| TraesCS7B01G025800.1 | Wheat | cytosol | 79.38 | 79.13 |
| TraesCS7A01G126500.1 | Wheat | cytosol | 79.38 | 79.13 |
| Zm00001d045213_P004 | Maize | cytosol | 78.44 | 77.47 |
| Zm00001d036285_P001 | Maize | cytosol, extracellular | 78.12 | 77.16 |
| EER89259 | Sorghum | cytosol | 77.81 | 76.85 |
| CDX88683 | Canola | cytosol | 74.06 | 76.7 |
| CDX71136 | Canola | cytosol | 74.06 | 76.7 |
| CDY32662 | Canola | cytosol | 74.69 | 76.6 |
| CDX80301 | Canola | cytosol | 72.5 | 75.82 |
| CDY33013 | Canola | cytosol | 72.5 | 75.82 |
| CDY61002 | Canola | cytosol | 74.69 | 75.16 |
| CDY10577 | Canola | cytosol | 68.12 | 74.91 |
| CDY24946 | Canola | cytosol | 74.38 | 74.84 |
| CDY20490 | Canola | cytosol | 73.12 | 74.52 |
| CDY02866 | Canola | cytosol | 74.69 | 73.99 |
| CDY40180 | Canola | cytosol | 72.81 | 73.5 |
| CDX83308 | Canola | cytosol | 72.81 | 73.27 |
| CDX86100 | Canola | cytosol | 70.0 | 73.2 |
| GSMUA_Achr7P10840_001 | Banana | cytosol | 72.81 | 72.81 |
| CDY45437 | Canola | cytosol | 72.5 | 72.73 |
| CDX95749 | Canola | cytosol | 72.5 | 72.5 |
| CDX86135 | Canola | cytosol | 55.0 | 69.29 |
| CDX80617 | Canola | cytosol | 68.75 | 68.97 |
| CDY22350 | Canola | cytosol | 70.94 | 68.58 |
| CDY60901 | Canola | cytosol | 70.94 | 68.58 |
| CDY18815 | Canola | cytosol | 68.12 | 68.55 |
| CDY27754 | Canola | cytosol | 68.75 | 68.54 |
| CDY05182 | Canola | cytosol | 68.75 | 68.54 |
| CDY25019 | Canola | cytosol | 67.81 | 68.24 |
| CDY05560 | Canola | cytosol | 67.5 | 67.92 |
| CDY40717 | Canola | cytosol | 68.44 | 60.16 |
| GSMUA_Achr4P31160_001 | Banana | cytosol | 81.25 | 60.05 |
| CDX74139 | Canola | cytosol | 68.12 | 57.98 |
| CDY38778 | Canola | cytosol | 42.5 | 44.44 |
| CDY11632 | Canola | cytosol | 42.5 | 44.44 |
| CDY52461 | Canola | cytosol | 42.19 | 44.12 |
| CDY69521 | Canola | cytosol | 43.12 | 44.09 |
| CDY55398 | Canola | cytosol | 43.12 | 44.09 |
| CDY51518 | Canola | cytosol | 43.12 | 44.09 |
| CDY30909 | Canola | cytosol | 41.88 | 43.79 |
| CDY47976 | Canola | cytosol | 42.81 | 43.77 |
| CDY14840 | Canola | cytosol | 42.81 | 43.77 |
| CDY66916 | Canola | cytosol | 42.81 | 43.77 |
| CDY45151 | Canola | cytosol | 41.56 | 43.46 |
| CDY37977 | Canola | cytosol | 41.56 | 43.46 |
| CDY07799 | Canola | cytosol | 41.56 | 43.46 |
| CDX93426 | Canola | cytosol | 41.56 | 43.46 |
| CDY34892 | Canola | cytosol | 41.56 | 43.46 |
| CDX88988 | Canola | cytosol | 42.19 | 43.13 |
| CDX98300 | Canola | cytosol | 42.19 | 43.13 |
| CDY00569 | Canola | cytosol | 42.19 | 43.13 |
| CDX71949 | Canola | cytosol | 42.19 | 43.13 |
| CDY06035 | Canola | cytosol | 42.19 | 43.13 |
| CDX92800 | Canola | cytosol | 40.31 | 42.3 |
| CDY46683 | Canola | cytosol | 40.31 | 42.3 |
| CDX89309 | Canola | cytosol | 40.31 | 42.3 |
| CDX94291 | Canola | cytosol | 40.31 | 42.3 |
| CDX67746 | Canola | cytosol | 26.25 | 41.38 |
| CDY24572 | Canola | cytosol | 38.75 | 40.92 |
| CDY25366 | Canola | cytosol | 38.75 | 40.92 |
| CDY70204 | Canola | cytosol | 38.44 | 40.59 |
| CDX82268 | Canola | cytosol | 38.12 | 40.26 |
| CDY33438 | Canola | cytosol | 38.12 | 40.26 |
| CDY69052 | Canola | cytosol | 38.75 | 39.49 |
| CDY03595 | Canola | cytosol | 38.44 | 37.16 |
| CDY36067 | Canola | plasma membrane | 38.44 | 16.76 |
| CDX89311 | Canola | cytosol, plastid | 26.56 | 12.32 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.1.1 | Gene3D:3.60.21.10 | GO:A0A078FJR1 | UniProt:A0A078FJR1 |
| EnsemblPlants:CDY13242 | ProteinID:CDY13242 | ProteinID:CDY13242.1 | InterPro:Calcineurin-like_PHP_ApaH | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004721 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00071159001 | InterPro:IPR029052 |
| InterPro:Metallo-depent_PP-like | PFAM:PF00149 | PFAM:PF16891 | PRINTS:PR00114 | ScanProsite:PS00125 | PANTHER:PTHR11668 |
| PANTHER:PTHR11668:SF294 | SMART:SM00156 | SUPFAM:SSF56300 | InterPro:STPPase_N | InterPro:Ser/Thr-sp_prot-phosphatase | UniParc:UPI0004EE34BB |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g24140DSerine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A078FJR1]
Coordinates
chrLK032033:+:65656..67582
Molecular Weight (calculated)
36277.4 Da
IEP (calculated)
5.929
GRAVY (calculated)
-0.313
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MDENLLDDII RRLLETNNGK QVKLLEAEIR QLCSASKEVF LSQPNLLELE APIKICAGDV HGQFPDLLRL FEYGGYPPAA NYLFLGDYVD RGKRSIETIC
101: LLLAYKLKYK LNFFLLRGNH ECASINRVYG FYDECKRRYN VRLWKSFTDC FNCLPVAALI DDKILCMHGG LSPDLKTLDD IRRIPRPVDV PDQGVLCDLL
201: WADPDKEIQG WGENDRGVSY TFGPDKVAEF LQTHDLDLVC RAHQVVEDGY EFFAKRQLVT IFSAPNYCGE FDNAGAMMSV DDSLTCSFQI LKSTEKKGRF
301: GYNNNVHRPG TPPHKGGKGG
101: LLLAYKLKYK LNFFLLRGNH ECASINRVYG FYDECKRRYN VRLWKSFTDC FNCLPVAALI DDKILCMHGG LSPDLKTLDD IRRIPRPVDV PDQGVLCDLL
201: WADPDKEIQG WGENDRGVSY TFGPDKVAEF LQTHDLDLVC RAHQVVEDGY EFFAKRQLVT IFSAPNYCGE FDNAGAMMSV DDSLTCSFQI LKSTEKKGRF
301: GYNNNVHRPG TPPHKGGKGG
001: MDETLLDDII RRLLATNNGR TVKQAQITET EIRQLCLASK EVFLSQPNLL ELEAPIKICG DVHGQFPDLL RLFEYGGYPP AANYLFLGDY VDRGKQSIET
101: ICLLLAYKVK YKFNFFLLRG NHECASINRV YGFYDECKRR YNVRLWKTFT ECFNCLPVSA LIDDKILCMH GGLSPDIKSL DDIRRIPRPI DVPDQGILCD
201: LLWADPDREI QGWGENDRGV SYTFGADKVA EFLQTHDLDL ICRAHQVVED GYEFFAKRQL VTIFSAPNYC GEFDNAGALM SVDDSLTCSF QILKASEKKG
301: RFGFNNNVPR PGTPPHKGGK GR
101: ICLLLAYKVK YKFNFFLLRG NHECASINRV YGFYDECKRR YNVRLWKTFT ECFNCLPVSA LIDDKILCMH GGLSPDIKSL DDIRRIPRPI DVPDQGILCD
201: LLWADPDREI QGWGENDRGV SYTFGADKVA EFLQTHDLDL ICRAHQVVED GYEFFAKRQL VTIFSAPNYC GEFDNAGALM SVDDSLTCSF QILKASEKKG
301: RFGFNNNVPR PGTPPHKGGK GR
Arabidopsis Description
TOPP6Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178V1Q1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.