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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 6
  • nucleus 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:cytosol
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67659
CDX72108
CDX76014
CDY27189
CDY47381
CDY51261

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G19980.1 CDX67659 AT3G56850.1 23404889
AT3G19980.1 CDX72108 AT3G56850.1 23404889
AT3G19980.1 CDX76014 AT3G56850.1 23404889
AT3G19980.1 CDY27189 AT3G56850.1 23404889
AT3G19980.1 CDY47381 AT3G56850.1 23404889
AT3G19980.1 CDY51261 AT3G56850.1 23404889
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001770.1-P Field mustard cytosol 100.0 100.0
CDY33438 Canola cytosol 98.02 98.02
CDY70204 Canola cytosol 98.02 98.02
CDY25366 Canola cytosol 97.36 97.36
CDY24572 Canola cytosol 96.7 96.7
AT3G19980.1 Thale cress cytosol 96.04 96.04
Solyc03g019900.2.1 Tomato cytosol 94.72 94.72
PGSC0003DMT400039336 Potato cytosol 94.72 94.72
KRH36174 Soybean cytosol, nucleus 94.72 94.72
Solyc06g072140.2.1 Tomato cytosol 94.39 94.39
VIT_10s0071g00950.t01 Wine grape cytosol 94.39 94.39
KRH36176 Soybean cytosol 94.39 94.39
KRG90576 Soybean cytosol, nucleus 94.39 94.39
GSMUA_AchrUn_... Banana cytosol 93.07 93.07
GSMUA_Achr9P21520_001 Banana cytosol 92.74 93.05
TraesCS3A01G261200.1 Wheat cytosol 91.75 91.75
TraesCS3D01G261300.1 Wheat cytosol 91.75 91.75
HORVU3Hr1G064290.2 Barley cytosol 91.75 91.75
TraesCS3B01G294200.1 Wheat cytosol, golgi, plastid 91.75 91.75
CDY69052 Canola cytosol 94.72 91.4
Os01t0691700-01 Rice cytosol, plasma membrane 91.09 91.09
EES01303 Sorghum cytosol 90.1 90.1
Zm00001d011634_P003 Maize cytosol 90.1 90.1
TraesCS1D01G380200.1 Wheat cytosol 89.11 89.11
CDY03595 Canola cytosol 94.72 86.71
PGSC0003DMT400069607 Potato cytosol 94.06 85.07
KRH40922 Soybean cytosol 85.81 84.69
TraesCS1B01G393500.1 Wheat cytosol 85.15 84.59
HORVU1Hr1G083000.1 Barley cytosol 89.44 75.91
TraesCS1A01G373300.1 Wheat cytosol 88.45 74.86
CDY46683 Canola cytosol 59.41 59.02
CDX92800 Canola cytosol 59.41 59.02
CDX89309 Canola cytosol 59.08 58.69
CDX94291 Canola cytosol 59.08 58.69
CDY37977 Canola cytosol 57.76 57.19
CDX93426 Canola cytosol 57.76 57.19
CDY38778 Canola cytosol 57.1 56.54
CDY07799 Canola cytosol 57.1 56.54
CDY52461 Canola cytosol 57.1 56.54
CDY34892 Canola cytosol 57.1 56.54
CDY11632 Canola cytosol 57.1 56.54
CDY30909 Canola cytosol 56.44 55.88
CDY45151 Canola cytosol 56.44 55.88
CDY47976 Canola cytosol 57.1 55.27
CDY14840 Canola cytosol 57.1 55.27
CDX98300 Canola cytosol 56.77 54.95
CDX88988 Canola cytosol 56.77 54.95
CDY00569 Canola cytosol 56.77 54.95
CDY06035 Canola cytosol 56.77 54.95
CDX71949 Canola cytosol 56.77 54.95
CDY69521 Canola cytosol 56.44 54.63
CDY66916 Canola cytosol 56.44 54.63
CDY55398 Canola cytosol 56.44 54.63
CDY51518 Canola cytosol 56.44 54.63
CDX67746 Canola cytosol 33.0 49.26
CDY71651 Canola cytosol 31.35 42.99
CDX86135 Canola cytosol 34.65 41.34
CDY36067 Canola plasma membrane 99.34 41.01
CDX71136 Canola cytosol 40.92 40.13
CDX83308 Canola cytosol 41.91 39.94
CDX80301 Canola cytosol 40.26 39.87
CDY33013 Canola cytosol 39.93 39.54
CDX80617 Canola cytosol 41.58 39.5
CDX88683 Canola cytosol 40.26 39.48
CDX95749 Canola cytosol 41.58 39.38
CDY18815 Canola cytosol 41.25 39.31
CDY61002 Canola cytosol 41.25 39.31
CDY24946 Canola cytosol 41.25 39.31
CDY05560 Canola cytosol 41.25 39.31
CDY20490 Canola cytosol 40.59 39.17
CDY32662 Canola cytosol 40.26 39.1
CDY25019 Canola cytosol 40.92 38.99
CDY10577 Canola cytosol 37.29 38.83
CDY05182 Canola cytosol 40.59 38.32
CDY27754 Canola cytosol 40.59 38.32
CDY45437 Canola cytosol 40.26 38.24
CDX90793 Canola cytosol 40.59 38.2
CDY40180 Canola cytosol 39.93 38.17
CDY13242 Canola cytosol 40.26 38.12
CDX86799 Canola cytosol 40.26 38.12
CDY22350 Canola cytosol 41.58 38.07
CDY02866 Canola cytosol 40.26 37.77
CDX86100 Canola cytosol 37.95 37.58
CDY05136 Canola cytosol 39.93 37.58
CDY60901 Canola cytosol 40.92 37.46
CDY25556 Canola cytosol 39.27 37.07
CDY34395 Canola cytosol 39.27 37.07
CDY40717 Canola cytosol 40.59 33.79
CDX74139 Canola cytosol 40.92 32.98
CDX89311 Canola cytosol, plastid 21.78 9.57
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.1.5Gene3D:3.60.21.10GO:A0A078D4Q5EnsemblPlants:CDX82268
ProteinID:CDX82268ProteinID:CDX82268.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00137370001InterPro:IPR029052InterPro:Metallo-depent_PP-likePFAM:PF00149PRINTS:PR00114ScanProsite:PS00125
PANTHER:PTHR11668PANTHER:PTHR11668:SF400SMART:SM00156SUPFAM:SSF56300InterPro:Ser/Thr-sp_prot-phosphataseUniParc:UPI0002540564
Description
BnaA03g35530D
Coordinates
chrLK031828:-:319784..322595
Molecular Weight (calculated)
34861.3 Da
IEP (calculated)
4.705
GRAVY (calculated)
-0.293
Length
303 amino acids
Sequence
(BLAST)
001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLIK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARH
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTISA IIDSTVLCVH GGLSPDVRTI DQIRLVDRNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL IFDENMERDV KYFNETEENN QMRGPRTGVP
301: YFL
Best Arabidopsis Sequence Match ( AT1G50370.1 )
(BLAST)
001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPE TNYIFMGDFV DRGYNSLEVF TILLLLKARH
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINNLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL
Arabidopsis Description
FYPP1Phytochrome-associated serine/threonine-protein phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX52]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.