CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019089.1-P	Field mustard	cytosol	100.0	100.0
CDY46683	Canola	cytosol	99.67	99.67
CDX94291	Canola	cytosol	97.05	97.05
CDX89309	Canola	cytosol	97.05	97.05
AT4G26720.1	Thale cress	cytosol	96.07	96.07
PGSC0003DMT400057148	Potato	cytosol	91.8	91.8
VIT_19s0090g01290.t01	Wine grape	cytosol	91.48	91.48
Solyc07g065020.2.1	Tomato	cytosol	91.48	91.48
KRH14305	Soybean	cytosol	90.82	89.94
KRH73826	Soybean	cytosol	90.49	89.61
GSMUA_Achr7P06210_001	Banana	cytosol	89.18	89.47
Zm00001d005110_P001	Maize	cytosol	72.13	88.71
EER98649	Sorghum	cytosol	89.18	88.6
Os09t0284200-01	Rice	cytosol, plasma membrane	89.18	88.6
TraesCS5D01G180100.1	Wheat	cytosol	88.52	87.95
TraesCS5A01G176800.1	Wheat	cytosol	88.52	87.95
GSMUA_Achr1P09340_001	Banana	cytosol	86.89	86.89
TraesCS5B01G173100.1	Wheat	cytosol	88.52	85.71
HORVU5Hr1G053560.4	Barley	cytosol	88.52	81.08
CDY38778	Canola	cytosol	65.25	65.03
CDY11632	Canola	cytosol	65.25	65.03
CDY52461	Canola	cytosol	64.92	64.71
CDY37977	Canola	cytosol	64.59	64.38
CDY34892	Canola	cytosol	64.59	64.38
CDY07799	Canola	cytosol	64.59	64.38
CDX93426	Canola	cytosol	64.59	64.38
CDY30909	Canola	cytosol	63.61	63.4
CDY45151	Canola	cytosol	63.61	63.4
CDY47976	Canola	cytosol	64.59	62.94
CDY69521	Canola	cytosol	64.59	62.94
CDY00569	Canola	cytosol	64.26	62.62
CDY66916	Canola	cytosol	64.26	62.62
CDY14840	Canola	cytosol	64.26	62.62
CDX88988	Canola	cytosol	63.93	62.3
CDY51518	Canola	cytosol	63.93	62.3
CDY55398	Canola	cytosol	63.93	62.3
CDX71949	Canola	cytosol	63.93	62.3
CDX98300	Canola	cytosol	63.93	62.3
CDY06035	Canola	cytosol	63.93	62.3
CDY24572	Canola	cytosol	60.0	60.4
CDY70204	Canola	cytosol	59.67	60.07
CDY25366	Canola	cytosol	59.67	60.07
CDY33438	Canola	cytosol	59.34	59.74
CDX82268	Canola	cytosol	59.02	59.41
CDY69052	Canola	cytosol	59.34	57.64
CDX67746	Canola	cytosol	38.03	57.14
CDY03595	Canola	cytosol	59.67	54.98
CDY71651	Canola	cytosol	32.46	44.8
CDX71136	Canola	cytosol	44.92	44.34
CDX88683	Canola	cytosol	44.59	44.01
CDX86135	Canola	cytosol	36.39	43.7
CDY32662	Canola	cytosol	43.93	42.95
CDY20490	Canola	cytosol	43.93	42.68
CDX80301	Canola	cytosol	42.62	42.48
CDY33013	Canola	cytosol	42.62	42.48
CDY05560	Canola	cytosol	44.26	42.45
CDX80617	Canola	cytosol	44.26	42.32
CDY25019	Canola	cytosol	43.93	42.14
CDY61002	Canola	cytosol	43.93	42.14
CDY24946	Canola	cytosol	43.93	42.14
CDY18815	Canola	cytosol	43.93	42.14
CDX95749	Canola	cytosol	43.93	41.88
CDX83308	Canola	cytosol	43.61	41.82
CDY02866	Canola	cytosol	43.93	41.49
CDY27754	Canola	cytosol	43.61	41.43
CDY05182	Canola	cytosol	43.61	41.43
CDY10577	Canola	cytosol	39.34	41.24
CDX90793	Canola	cytosol	43.28	40.99
CDY34395	Canola	cytosol	42.95	40.81
CDY25556	Canola	cytosol	42.95	40.81
CDY45437	Canola	cytosol	42.62	40.75
CDY40180	Canola	cytosol	42.3	40.69
CDY05136	Canola	cytosol	42.95	40.68
CDX86799	Canola	cytosol	42.62	40.62
CDY13242	Canola	cytosol	42.3	40.31
CDX86100	Canola	cytosol	40.33	40.2
CDY22350	Canola	cytosol	42.62	39.27
CDY60901	Canola	cytosol	42.3	38.97
CDY40717	Canola	cytosol	43.61	36.54
CDX74139	Canola	cytosol	43.61	35.37
CDY36067	Canola	plasma membrane	59.02	24.52
CDX89311	Canola	cytosol, plastid	20.0	8.84

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.3.1	Gene3D:3.60.21.10	GO:A0A078DTX1	EnsemblPlants:CDX92800
ProteinID:CDX92800	ProteinID:CDX92800.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00154629001	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PRINTS:PR00114	ScanProsite:PS00125
PANTHER:PTHR11668	PANTHER:PTHR11668:SF380	SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0002541257

Description

BnaC07g40580D

Coordinates

chrLK031873:-:876018..878208

Molecular Weight (calculated)

34889.6 Da

IEP (calculated)

4.773

GRAVY (calculated)

-0.238

Length

305 amino acids

Sequence
(BLAST)

001: MSDLDRQIEQ LKRCEPLSES EVKSLCLKAM EILVEESNVQ RVDAPVTLCG DIHGQFYDMM ELFKVGGDCP KTNYLFLGDF VDRGYYSVET FLLLLALKVR
101: YPDRITLIRG NHESRQITQV YGFYDECLRK YGSVNVWRYC TDIFDYMSLS AVVENKIFCV HGGLSPTINT LDQIRTIDRK QEVPHDGAMC DLLWSDPEDI
201: VEGWGLSPRG AGFLFGGSVV TTFNHTNNID YIGRAHQLVM EGYKWMFDSQ IVTVWSAPNY CYRCGNIASI LELDENLNKE FRVFQAAQQD SRGPPAKKPA
301: PDYFL

Best Arabidopsis Sequence Match ( AT4G26720.1 )
(BLAST)

001: MSDLDRQIGQ LKRCEPLSES EVKALCLKAM EILVEESNVQ RVDAPVTLCG DIHGQFYDMM ELFKVGGDCP KTNYLFMGDF VDRGYYSVET FLLLLALKVR
101: YPDRITLIRG NHESRQITQV YGFYDECLRK YGSSNVWRYC TDIFDYMSLS AVVENKIFCV HGGLSPAIMT LDQIRTIDRK QEVPHDGAMC DLLWSDPEDI
201: VDGWGLSPRG AGFLFGGSVV TSFNHSNNID YIARAHQLVM EGYKWMFDSQ IVTVWSAPNY CYRCGNVASI LELDENLNKE FRVFDAAQQD SRGPPAKKPA
301: PDYFL

Arabidopsis Description

PPX1Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178V0Q8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.