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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX97961
CDY20997
CDY49782
CDY57038

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G43380.1 CDX97961 AT1G11440.1 21798944
AT5G43380.1 CDY20997 AT1G11440.1 21798944
AT5G43380.1 CDY49782 AT1G11440.1 21798944
AT5G43380.1 CDY57038 AT1G11440.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY22350 Canola cytosol 99.4 99.4
AT5G43380.1 Thale cress cytosol 94.26 94.26
CDY71651 Canola cytosol 53.17 79.64
CDY20490 Canola cytosol 72.21 76.11
CDY61002 Canola cytosol 72.81 75.79
CDX88683 Canola cytosol 70.69 75.73
CDY10577 Canola cytosol 66.47 75.6
CDY32662 Canola cytosol 71.0 75.32
CDX83308 Canola cytosol 72.21 75.16
CDX71136 Canola cytosol 70.09 75.08
CDY40180 Canola cytosol 71.9 75.08
CDY24946 Canola cytosol 71.9 74.84
CDY33013 Canola cytosol 69.18 74.84
CDY25556 Canola cytosol 72.51 74.77
CDY34395 Canola cytosol 72.51 74.77
CDY45437 Canola cytosol 71.9 74.61
CDX95749 Canola cytosol 71.9 74.38
CDX80301 Canola cytosol 68.28 73.86
CDY02866 Canola cytosol 71.3 73.06
CDX86100 Canola cytosol 67.37 72.88
CDX86799 Canola cytosol 68.88 71.25
CDX90793 Canola cytosol 69.18 71.12
CDY13242 Canola cytosol 68.58 70.94
CDY05136 Canola cytosol 68.58 70.5
CDX86135 Canola cytosol 54.08 70.47
CDX80617 Canola cytosol 67.67 70.22
CDY25019 Canola cytosol 67.37 70.13
CDY05560 Canola cytosol 67.07 69.81
CDY18815 Canola cytosol 66.16 68.87
CDY27754 Canola cytosol 66.77 68.85
CDY05182 Canola cytosol 66.77 68.85
CDY40717 Canola cytosol 66.77 60.71
CDX74139 Canola cytosol 66.47 58.51
CDY11632 Canola cytosol 40.18 43.46
CDY07799 Canola cytosol 40.18 43.46
CDY34892 Canola cytosol 40.18 43.46
CDY38778 Canola cytosol 40.18 43.46
CDY52461 Canola cytosol 39.88 43.14
CDY45151 Canola cytosol 39.88 43.14
CDY30909 Canola cytosol 39.88 43.14
CDX94291 Canola cytosol 39.27 42.62
CDX89309 Canola cytosol 39.27 42.62
CDY37977 Canola cytosol 39.27 42.48
CDX93426 Canola cytosol 39.27 42.48
CDX92800 Canola cytosol 38.97 42.3
CDY46683 Canola cytosol 38.97 42.3
CDY55398 Canola cytosol 39.88 42.17
CDY51518 Canola cytosol 39.88 42.17
CDY69521 Canola cytosol 39.88 42.17
CDY47976 Canola cytosol 39.88 42.17
CDY14840 Canola cytosol 39.88 42.17
CDY06035 Canola cytosol 39.88 42.17
CDY00569 Canola cytosol 39.88 42.17
CDX98300 Canola cytosol 39.88 42.17
CDX88988 Canola cytosol 39.88 42.17
CDX71949 Canola cytosol 39.88 42.17
CDY66916 Canola cytosol 39.58 41.85
CDY70204 Canola cytosol 38.07 41.58
CDY33438 Canola cytosol 37.46 40.92
CDY25366 Canola cytosol 37.46 40.92
CDY24572 Canola cytosol 37.46 40.92
CDX82268 Canola cytosol 37.46 40.92
CDX67746 Canola cytosol 24.77 40.39
CDY69052 Canola cytosol 37.16 39.17
CDY03595 Canola cytosol 36.86 36.86
CDY36067 Canola plasma membrane 37.76 17.03
CDX89311 Canola cytosol, plastid 22.66 10.87
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.1.1Gene3D:3.60.21.10GO:A0A078J815UniProt:A0A078J815
EnsemblPlants:CDY60901ProteinID:CDY60901ProteinID:CDY60901.1InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824
GO:GO:0004721GO:GO:0005488GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00030243001InterPro:IPR029052
InterPro:Metallo-depent_PP-likePFAM:PF00149PFAM:PF16891PRINTS:PR00114ScanProsite:PS00125PANTHER:PTHR11668
PANTHER:PTHR11668:SF390SMART:SM00156SUPFAM:SSF56300InterPro:STPPase_NInterPro:Ser/Thr-sp_prot-phosphataseUniParc:UPI0001BA4605
SEG:seg:::::
Description
BnaCnng37040DSerine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A078J815]
Coordinates
chrLK033929:+:2065..4210
Molecular Weight (calculated)
37840.6 Da
IEP (calculated)
7.844
GRAVY (calculated)
-0.234
Length
331 amino acids
Sequence
(BLAST)
001: MEAGALNSVI NRLLEAREKP GKIVQLFETE IKQLCFVSRD IFLRQPNLLE LEAPVKICGD IHGQYPDLLR LFEHGGYPPR SNYLFLGDYV DRGKQSLETI
101: CLLLAYKIKF PENFFLLRGN HESASINRIY GFYDECKRRF SVKIWRIFTD CFNCLPVAAL IDDRILCMHG GLSPELRSLR QIRDIRRPTD IPDRGLLCDL
201: LWSDPDKVVR GWGPNDRGVS YTFGSDTVSE FLKRLDLDLI CRAHQVVEDG FEFFANKQLV TIFSAPNYCG EFDNAGAMMS VDEDLICSFQ ILKPNEKKSK
301: FSFGSRGGVK TGFPYPKVKS ILSSQSSKQY N
Best Arabidopsis Sequence Match ( AT5G43380.1 )
(BLAST)
001: MDPGTLNSVI NRLLEAREKP GKIVQLSETE IKQLCFVSRD IFLRQPNLLE LEAPVKICGD IHGQYPDLLR LFEHGGYPPN SNYLFLGDYV DRGKQSLETI
101: CLLLAYKIKF PENFFLLRGN HESASINRIY GFYDECKRRF SVKIWRIFTD CFNCLPVAAL IDERIFCMHG GLSPELLSLR QIRDIRRPTD IPDRGLLCDL
201: LWSDPDKDVR GWGPNDRGVS YTFGSDIVSG FLKRLDLDLI CRAHQVVEDG FEFFANKQLV TIFSAPNYCG EFDNAGAMMS VSEDLTCSFQ ILKSNDKKSK
301: FSFGSRGGAK TSFPYPKVKS ILSSQNSKEY N
Arabidopsis Description
TOPP7Serine/threonine-protein phosphatase PP1 isozyme 7 [Source:UniProtKB/Swiss-Prot;Acc:O82733]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.