Factsheet for AT5G43380.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60901	Canola	cytosol	94.26	94.26
CDY22350	Canola	cytosol	94.26	94.26
Bra033678.1-P	Field mustard	cytosol	90.94	93.19
AT5G59160.1	Thale cress	cytosol	70.39	74.68
AT2G29400.1	Thale cress	cytosol	71.3	74.21
AT3G46820.1	Thale cress	cytosol	69.49	73.72
AT2G39840.1	Thale cress	cytosol	71.3	73.52
AT1G64040.1	Thale cress	cytosol	71.3	73.29
AT3G05580.1	Thale cress	cytosol	66.77	69.5
AT4G11240.1	Thale cress	cytosol	66.47	68.32
AT5G27840.4	Thale cress	cytosol	64.95	65.15
AT1G10430.1	Thale cress	cytosol	40.48	43.79
AT1G69960.1	Thale cress	cytosol	40.18	43.32
AT1G59830.1	Thale cress	cytosol	39.88	43.14
AT2G42500.1	Thale cress	cytosol	40.48	42.81
AT3G58500.1	Thale cress	cytosol	40.48	42.81
AT4G26720.1	Thale cress	cytosol	38.67	41.97
AT3G19980.1	Thale cress	cytosol	36.86	40.26
AT1G50370.1	Thale cress	cytosol	36.86	40.26
AT5G55260.2	Thale cress	cytosol	40.48	38.73

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	EntrezGene:834356	ProteinID:AED94952.1
ProteinID:AED94953.1	ProteinID:AED94954.1	ArrayExpress:AT5G43380	EnsemblPlantsGene:AT5G43380	RefSeq:AT5G43380	TAIR:AT5G43380
RefSeq:AT5G43380-TAIR-G	EnsemblPlants:AT5G43380.1	TAIR:AT5G43380.1	EMBL:AY136464	ProteinID:BAA24283.1	ProteinID:BAA97417.1
EMBL:BT002143	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0046872	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	RefSeq:NP_001032000.1	RefSeq:NP_568625.1	RefSeq:NP_851123.1
UniProt:O82733	PFAM:PF00149	PFAM:PF16891	PO:PO:0000293	PO:PO:0007115	PO:PO:0007611
PO:PO:0007616	PO:PO:0009005	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0020030	PO:PO:0025022	PRINTS:PR00114
ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF390	SMART:SM00156	SUPFAM:SSF56300	InterPro:STPPase_N
InterPro:Ser/Thr-sp_prot-phosphatase	Symbol:TOPP6	EMBL:U80920	UniParc:UPI00000AC055	SEG:seg	:

Description

TOPP7Serine/threonine-protein phosphatase PP1 isozyme 7 [Source:UniProtKB/Swiss-Prot;Acc:O82733]

Coordinates

chr5:-:17419790..17421982

Molecular Weight (calculated)

37707.3 Da

IEP (calculated)

7.294

GRAVY (calculated)

-0.257

Length

331 amino acids

Sequence
(BLAST)

001: MDPGTLNSVI NRLLEAREKP GKIVQLSETE IKQLCFVSRD IFLRQPNLLE LEAPVKICGD IHGQYPDLLR LFEHGGYPPN SNYLFLGDYV DRGKQSLETI
101: CLLLAYKIKF PENFFLLRGN HESASINRIY GFYDECKRRF SVKIWRIFTD CFNCLPVAAL IDERIFCMHG GLSPELLSLR QIRDIRRPTD IPDRGLLCDL
201: LWSDPDKDVR GWGPNDRGVS YTFGSDIVSG FLKRLDLDLI CRAHQVVEDG FEFFANKQLV TIFSAPNYCG EFDNAGAMMS VSEDLTCSFQ ILKSNDKKSK
301: FSFGSRGGAK TSFPYPKVKS ILSSQNSKEY N

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.