Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83308 | Canola | cytosol | 95.91 | 95.91 |
| Bra000475.1-P | Field mustard | cytosol | 95.91 | 95.91 |
| CDX95749 | Canola | cytosol | 96.23 | 95.62 |
| CDY40180 | Canola | cytosol | 94.03 | 94.32 |
| Bra018397.1-P | Field mustard | cytosol | 89.94 | 93.77 |
| CDY45437 | Canola | cytosol | 94.03 | 93.73 |
| VIT_06s0004g05530.t01 | Wine grape | cytosol | 80.82 | 85.38 |
| Solyc06g076430.2.1 | Tomato | cytosol, nucleus | 81.13 | 83.23 |
| AT5G59160.1 | Thale cress | cytosol | 81.45 | 83.01 |
| PGSC0003DMT400078199 | Potato | cytosol | 80.82 | 82.9 |
| Solyc06g005800.2.1 | Tomato | cytosol, nucleus | 82.08 | 81.82 |
| GSMUA_Achr8P19510_001 | Banana | cytosol | 71.7 | 81.72 |
| Os03t0268000-01 | Rice | cytosol | 82.7 | 81.68 |
| HORVU4Hr1G060490.1 | Barley | cytosol | 82.39 | 81.62 |
| TraesCS4A01G093600.1 | Wheat | cytosol | 82.39 | 81.62 |
| TraesCS4D01G211500.1 | Wheat | cytosol | 82.39 | 81.62 |
| TraesCS4B01G210800.1 | Wheat | cytosol | 82.08 | 81.31 |
| AT3G46820.1 | Thale cress | cytosol | 79.56 | 81.09 |
| EER95117 | Sorghum | cytosol | 82.08 | 81.06 |
| AT2G39840.1 | Thale cress | cytosol | 81.45 | 80.69 |
| HORVU4Hr1G060530.1 | Barley | mitochondrion, peroxisome | 78.3 | 80.06 |
| Zm00001d047835_P003 | Maize | cytosol, extracellular, plasma membrane | 81.13 | 79.88 |
| PGSC0003DMT400053683 | Potato | cytosol | 65.09 | 79.31 |
| AT1G64040.1 | Thale cress | cytosol | 75.79 | 74.84 |
| AT4G11240.1 | Thale cress | cytosol | 73.9 | 72.98 |
| AT3G05580.1 | Thale cress | cytosol | 72.64 | 72.64 |
| AT5G43380.1 | Thale cress | cytosol | 74.21 | 71.3 |
| AT5G27840.4 | Thale cress | cytosol | 72.33 | 69.7 |
| Zm00001d028568_P004 | Maize | cytosol | 82.39 | 63.9 |
| AT1G10430.1 | Thale cress | cytosol | 42.14 | 43.79 |
| AT2G42500.1 | Thale cress | cytosol | 43.08 | 43.77 |
| AT1G69960.1 | Thale cress | cytosol | 42.14 | 43.65 |
| AT1G59830.1 | Thale cress | cytosol | 41.82 | 43.46 |
| AT3G58500.1 | Thale cress | cytosol | 42.45 | 43.13 |
| AT4G26720.1 | Thale cress | cytosol | 40.88 | 42.62 |
| AT3G19980.1 | Thale cress | cytosol | 39.31 | 41.25 |
| AT1G50370.1 | Thale cress | cytosol | 39.31 | 41.25 |
| AT5G55260.2 | Thale cress | cytosol | 42.77 | 39.31 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.1.1 | Gene3D:3.60.21.10 | EntrezGene:817489 | UniProt:A0A178VXL8 |
| ProteinID:AAC95198.1 | ProteinID:AEC08250.1 | ArrayExpress:AT2G29400 | EnsemblPlantsGene:AT2G29400 | RefSeq:AT2G29400 | TAIR:AT2G29400 |
| RefSeq:AT2G29400-TAIR-G | EnsemblPlants:AT2G29400.1 | TAIR:AT2G29400.1 | EMBL:AY080871 | EMBL:AY142593 | Unigene:At.282 |
| InterPro:Calcineurin-like_PHP_ApaH | GO:GO:0000164 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | GO:GO:0046872 | InterPro:IPR029052 | EMBL:M93408 | InterPro:Metallo-depent_PP-like | RefSeq:NP_180501.1 |
| ProteinID:OAP11099.1 | UniProt:P30366 | PFAM:PF00149 | PFAM:PF16891 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00114 |
| ScanProsite:PS00125 | PANTHER:PTHR11668 | PANTHER:PTHR11668:SF392 | SMART:SM00156 | SUPFAM:SSF56300 | InterPro:STPPase_N |
| InterPro:Ser/Thr-sp_prot-phosphatase | Symbol:TOPP1 | UniParc:UPI00000017AC | EMBL:X64328 | : | : |
Description
TOPP1Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VXL8]
Coordinates
chr2:-:12613014..12615414
Molecular Weight (calculated)
36280.6 Da
IEP (calculated)
4.780
GRAVY (calculated)
-0.233
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEKPAQEQE QKRAMEPAVL DDIIRRLVEF RNTRPGSGKQ VHLSEGEIRQ LCAVSKEIFL QQPNLLELEA PIKICGDIHG QYSDLLRLFE YGGFPPEANY
101: LFLGDYVDRG KQSLETICLL LAYKIKYPEN FFLLRGNHES ASINRIYGFY DECKRRFNVR LWKIFTDCFN CLPVAALIDD RILCMHGGIS PELKSLDQIR
201: NIARPMDIPE SGLVCDLLWS DPSGDVGWGM NDRGVSYTFG ADKVAEFLEK HDMDLICRAH QVVEDGYEFF AERQLVTVFS APNYCGEFDN AGAMMSIDES
301: LMCSFQILKP SEKKSPFL
101: LFLGDYVDRG KQSLETICLL LAYKIKYPEN FFLLRGNHES ASINRIYGFY DECKRRFNVR LWKIFTDCFN CLPVAALIDD RILCMHGGIS PELKSLDQIR
201: NIARPMDIPE SGLVCDLLWS DPSGDVGWGM NDRGVSYTFG ADKVAEFLEK HDMDLICRAH QVVEDGYEFF AERQLVTVFS APNYCGEFDN AGAMMSIDES
301: LMCSFQILKP SEKKSPFL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.