Factsheet for Bra018397.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45437	Canola	cytosol	99.67	95.3
CDY40180	Canola	cytosol	97.38	93.69
Bra000475.1-P	Field mustard	cytosol	96.07	92.14
AT2G29400.1	Thale cress	cytosol	93.77	89.94
VIT_06s0004g05530.t01	Wine grape	cytosol	83.61	84.72
Bra002590.1-P	Field mustard	cytosol	85.25	83.6
Bra020335.1-P	Field mustard	cytosol	84.59	82.69
Bra006731.1-P	Field mustard	cytosol	83.28	82.2
PGSC0003DMT400078199	Potato	cytosol	82.95	81.61
Solyc06g076430.2.1	Tomato	cytosol, nucleus	82.95	81.61
Bra018191.1-P	Field mustard	cytosol	82.3	80.97
GSMUA_Achr8P19510_001	Banana	cytosol	73.11	79.93
Bra005009.1-P	Field mustard	cytosol	75.74	79.66
Solyc06g005800.2.1	Tomato	cytosol, nucleus	82.95	79.31
Os03t0268000-01	Rice	cytosol	82.95	78.57
TraesCS4D01G211500.1	Wheat	cytosol	82.3	78.19
TraesCS4A01G093600.1	Wheat	cytosol	82.3	78.19
HORVU4Hr1G060490.1	Barley	cytosol	82.3	78.19
HORVU4Hr1G060530.1	Barley	mitochondrion, peroxisome	79.67	78.14
EER95117	Sorghum	cytosol	82.3	77.95
TraesCS4B01G210800.1	Wheat	cytosol	81.97	77.88
Zm00001d047835_P003	Maize	cytosol, extracellular, plasma membrane	81.31	76.78
PGSC0003DMT400053683	Potato	cytosol	64.92	75.86
Bra033678.1-P	Field mustard	cytosol	78.03	73.68
Bra035240.1-P	Field mustard	cytosol	76.39	72.81
Bra027677.1-P	Field mustard	cytosol	76.39	72.59
Bra000740.1-P	Field mustard	cytosol	76.07	72.27
Bra009941.1-P	Field mustard	cytosol	74.75	71.47
Bra040535.1-P	Field mustard	cytosol	73.77	70.75
Bra039424.1-P	Field mustard	cytosol	74.43	70.72
Bra001155.1-P	Field mustard	cytosol	73.44	70.44
Bra020573.1-P	Field mustard	cytosol	73.77	65.41
Zm00001d028568_P004	Maize	cytosol	81.97	60.98
Bra000153.1-P	Field mustard	cytosol	82.95	51.63
Bra027833.1-P	Field mustard	cytosol	44.59	44.44
Bra019934.1-P	Field mustard	cytosol	44.59	44.44
Bra031712.1-P	Field mustard	cytosol	44.26	44.12
Bra016247.1-P	Field mustard	cytosol	44.26	44.12
Bra016870.1-P	Field mustard	cytosol	44.59	43.45
Bra007398.1-P	Field mustard	cytosol	44.26	43.13
Bra014569.1-P	Field mustard	cytosol	44.26	43.13
Bra003340.1-P	Field mustard	cytosol	43.61	42.77
Bra019089.1-P	Field mustard	cytosol	42.62	42.62
Bra038247.1-P	Field mustard	cytosol	40.66	40.92
Bra000262.1-P	Field mustard	cytosol	43.93	40.73
Bra001770.1-P	Field mustard	cytosol	40.0	40.26
Bra004705.1-P	Field mustard	cytosol	43.61	39.47
Bra027930.1-P	Field mustard	cytosol	22.62	36.9
Bra035830.1-P	Field mustard	cytosol	39.67	35.91
Bra014246.1-P	Field mustard	cytosol	39.67	34.87
Bra026408.1-P	Field mustard	cytosol	42.95	10.65

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	EnsemblPlantsGene:Bra018397	EnsemblPlants:Bra018397.1
EnsemblPlants:Bra018397.1-P	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488
GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	UniProt:M4DPF6	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF392	SMART:SM00156
SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0002547D70	:	:

Description

AT2G29400 (E=1e-170) TOPP1, PP1-AT | TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1); protein serine/threonine phosphatase

Coordinates

chrA05:+:7962962..7964409

Molecular Weight (calculated)

34603.4 Da

IEP (calculated)

4.643

GRAVY (calculated)

-0.129

Length

305 amino acids

Sequence
(BLAST)

001: MEPAVLDDII RRLVEFRNTR PGSGKQVHLS EGEIRQLCAV SKDIFLQQPI LLELEAPIKI CGDIHGQYSD LLRLFEYGGF PPDANYLFLG DYVDRGKQSL
101: ETICLLLAYK IKYPENFFLL RGNHECASIN RIYGFYDECK RRFNVRLWKL FTDCFNCLPV AALIDDRILC MHGGISPELT SLDQIRSISR PLDIPDSGLV
201: CDLLWSDPSG DVKGWGANDR GVSYTFGADT VAEFLQKNDM DLICRAHQVV EDGYEFFAER QVVTVFSAPN YCGEFDNAGA MMSIDESLMC SFQILKPSDK
301: RSPFQ

Best Arabidopsis Sequence Match ( AT2G29400.1 )
(BLAST)

001: MAEKPAQEQE QKRAMEPAVL DDIIRRLVEF RNTRPGSGKQ VHLSEGEIRQ LCAVSKEIFL QQPNLLELEA PIKICGDIHG QYSDLLRLFE YGGFPPEANY
101: LFLGDYVDRG KQSLETICLL LAYKIKYPEN FFLLRGNHES ASINRIYGFY DECKRRFNVR LWKIFTDCFN CLPVAALIDD RILCMHGGIS PELKSLDQIR
201: NIARPMDIPE SGLVCDLLWS DPSGDVGWGM NDRGVSYTFG ADKVAEFLEK HDMDLICRAH QVVEDGYEFF AERQLVTVFS APNYCGEFDN AGAMMSIDES
301: LMCSFQILKP SEKKSPFL

Arabidopsis Description

TOPP1Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VXL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.