Factsheet for PGSC0003DMT400053683

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g005800.2.1	Tomato	cytosol, nucleus	100.0	81.82
PGSC0003DMT400078199	Potato	cytosol	90.8	76.45
CDY71651	Canola	cytosol	61.69	72.85
CDX88683	Canola	cytosol	80.84	68.28
AT5G59160.1	Thale cress	cytosol	81.61	68.27
Bra006731.1-P	Field mustard	cytosol	80.46	67.96
CDY32662	Canola	cytosol	81.23	67.95
Bra020335.1-P	Field mustard	cytosol	81.23	67.95
VIT_06s0004g05530.t01	Wine grape	cytosol	78.16	67.77
CDX71136	Canola	cytosol	80.08	67.64
Bra002590.1-P	Field mustard	cytosol	80.46	67.52
PGSC0003DMT400017290	Potato	cytosol	76.63	65.79
CDX80301	Canola	cytosol	77.01	65.69
CDY33013	Canola	cytosol	77.01	65.69
Bra018191.1-P	Field mustard	cytosol	77.78	65.48
CDY02866	Canola	cytosol	80.84	65.33
TraesCS4A01G093600.1	Wheat	cytosol	80.08	65.11
TraesCS4D01G211500.1	Wheat	cytosol	80.08	65.11
HORVU4Hr1G060490.1	Barley	cytosol	80.08	65.11
AT2G29400.1	Thale cress	cytosol	79.31	65.09
AT3G46820.1	Thale cress	cytosol	77.78	65.06
Bra018397.1-P	Field mustard	cytosol	75.86	64.92
TraesCS4B01G210800.1	Wheat	cytosol	79.69	64.8
Os03t0268000-01	Rice	cytosol	79.69	64.6
Bra000475.1-P	Field mustard	cytosol	78.16	64.15
CDX83308	Canola	cytosol	78.16	64.15
HORVU4Hr1G060530.1	Barley	mitochondrion, peroxisome	76.25	63.99
EER95117	Sorghum	cytosol	78.93	63.98
Zm00001d047835_P003	Maize	cytosol, extracellular, plasma membrane	78.93	63.78
CDX95749	Canola	cytosol	78.16	63.75
CDY40180	Canola	cytosol	76.63	63.09
CDX86100	Canola	cytosol	73.95	63.07
CDY45437	Canola	cytosol	77.01	63.01
PGSC0003DMT400044371	Potato	cytosol	77.78	61.52
GSMUA_Achr8P19510_001	Banana	cytosol	65.52	61.29
PGSC0003DMT400041996	Potato	cytosol	77.01	58.43
PGSC0003DMT400063710	Potato	cytosol	66.67	55.24
Zm00001d028568_P004	Maize	cytosol	79.31	50.49
PGSC0003DMT400060162	Potato	cytosol	74.71	47.22
PGSC0003DMT400058216	Potato	cytosol	41.0	34.97
PGSC0003DMT400013570	Potato	cytosol	41.0	34.97
PGSC0003DMT400004853	Potato	cytosol	40.23	34.31
PGSC0003DMT400079934	Potato	cytosol	41.0	34.29
PGSC0003DMT400057148	Potato	cytosol	39.85	34.1
PGSC0003DMT400081973	Potato	cytosol	40.61	33.87
PGSC0003DMT400039336	Potato	cytosol	36.4	31.35
PGSC0003DMT400069607	Potato	cytosol	36.78	28.66
CDX89311	Canola	cytosol, plastid	24.14	9.13

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.21.10	MapMan:50.3.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052
UniProt:M1BVC1	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF16891	EnsemblPlantsGene:PGSC0003DMG400020827	PGSC:PGSC0003DMG400020827
EnsemblPlants:PGSC0003DMT400053683	PRINTS:PR00114	PANTHER:PTHR11668	PANTHER:PTHR11668:SF392	SMART:SM00156	SUPFAM:SSF56300
InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000294C32B	SEG:seg	:	:

Description

Serine/threonine-protein phosphatase PP1 isozyme 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400020827]

Coordinates

chr6:+:4173022..4177644

Molecular Weight (calculated)

29669.4 Da

IEP (calculated)

4.323

GRAVY (calculated)

-0.252

Length

261 amino acids

Sequence
(BLAST)

001: MAQNEHQQQQ QQQGLIEPAV LDDIINRLLE FRNARTVRQV QISEAEIRSL CSASREIFLQ QPNLLELEAP IKICGDIHGQ YGDLLRLFEY GGFPPEANYL
101: FLGDYVDREC FNCLPVAALI DEKILCMHGG LSPDLTNLDQ IRNLPRPTDV PDSGLLCDLL WSDPSREVKG WGMNDRGVSY TFGPDKVAEF LMQHDMDLVC
201: RAHQVVEDGY EFFAERQLVT IFSAPNYCGE FDNAGAMMSV DESLMCSFQI LKPTDRKPRF L

Best Arabidopsis Sequence Match ( AT2G29400.1 )
(BLAST)

001: MAEKPAQEQE QKRAMEPAVL DDIIRRLVEF RNTRPGSGKQ VHLSEGEIRQ LCAVSKEIFL QQPNLLELEA PIKICGDIHG QYSDLLRLFE YGGFPPEANY
101: LFLGDYVDRG KQSLETICLL LAYKIKYPEN FFLLRGNHES ASINRIYGFY DECKRRFNVR LWKIFTDCFN CLPVAALIDD RILCMHGGIS PELKSLDQIR
201: NIARPMDIPE SGLVCDLLWS DPSGDVGWGM NDRGVSYTFG ADKVAEFLEK HDMDLICRAH QVVEDGYEFF AERQLVTVFS APNYCGEFDN AGAMMSIDES
301: LMCSFQILKP SEKKSPFL

Arabidopsis Description

TOPP1Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VXL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.