Factsheet for PGSC0003DMT400044371

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g090060.2.1	Tomato	cytosol	98.18	98.18
VIT_05s0049g00890.t01	Wine grape	cytosol	83.64	84.66
GSMUA_Achr4P29300_001	Banana	cytosol	81.52	84.59
GSMUA_Achr1P01390_001	Banana	cytosol	83.94	84.19
GSMUA_Achr4P25210_001	Banana	cytosol	81.21	84.01
PGSC0003DMT400041996	Potato	cytosol	87.27	83.72
PGSC0003DMT400017290	Potato	cytosol	76.97	83.55
GSMUA_Achr11P...	Banana	cytosol	81.82	82.82
KRG92313	Soybean	cytosol, nucleus	81.82	81.82
PGSC0003DMT400078199	Potato	cytosol	76.67	81.61
KRH69127	Soybean	cytosol	77.27	79.94
PGSC0003DMT400053683	Potato	cytosol	61.52	77.78
KRH34478	Soybean	cytosol	81.21	77.68
KRH31706	Soybean	cytosol	79.09	77.22
PGSC0003DMT400063710	Potato	cytosol	66.97	70.16
PGSC0003DMT400060162	Potato	cytosol	84.24	67.31
PGSC0003DMT400057148	Potato	cytosol	41.21	44.59
PGSC0003DMT400079934	Potato	cytosol	41.82	44.23
PGSC0003DMT400081973	Potato	cytosol	41.52	43.77
PGSC0003DMT400058216	Potato	cytosol	40.3	43.46
PGSC0003DMT400013570	Potato	cytosol	40.3	43.46
PGSC0003DMT400004853	Potato	cytosol	39.7	42.81
PGSC0003DMT400039336	Potato	cytosol	36.36	39.6
PGSC0003DMT400069607	Potato	cytosol	36.67	36.12

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102590224	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872
InterPro:IPR029052	UniProt:M1BG35	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF16891	EnsemblPlantsGene:PGSC0003DMG400017227
PGSC:PGSC0003DMG400017227	EnsemblPlants:PGSC0003DMT400044371	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF306
SMART:SM00156	SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000295C6E0	RefSeq:XP_006354491.1

Description

Serine/threonine-protein phosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400017227]

Coordinates

chr9:+:56359020..56364320

Molecular Weight (calculated)

37824.7 Da

IEP (calculated)

6.835

GRAVY (calculated)

-0.269

Length

330 amino acids

Sequence
(BLAST)

001: MSRKKVMDSF SLDDIINRLL EVRNRPGKQV QLSEAEIRYL CLESKEIFLK QPNLLELDAP IKICGDIHGQ YSDLLRLFEY GGLPPRSNYL FLGDYVDRGK
101: QSLETICLMF AYKIKYPENF FLLRGNHECA SINRIYGFYD ECKRRFNVRL WKIFTECFNC LPVAALVDEK ILCMHGGLSP DLHHLDQIRN LHRPTDVPEA
201: GLLCDLLWSD PSRDVRGWGM NDRGVSYTFG PDKVTEYLQK LDLDLICRAH QVVEDGYEFF ADRQLVTIFS APNYCGEFDN AGAVMSVDET LMCSFQILKP
301: AEKKPKFGFG STTKNGTSLT KTKSFLGKMG

Best Arabidopsis Sequence Match ( AT2G29400.1 )
(BLAST)

001: MAEKPAQEQE QKRAMEPAVL DDIIRRLVEF RNTRPGSGKQ VHLSEGEIRQ LCAVSKEIFL QQPNLLELEA PIKICGDIHG QYSDLLRLFE YGGFPPEANY
101: LFLGDYVDRG KQSLETICLL LAYKIKYPEN FFLLRGNHES ASINRIYGFY DECKRRFNVR LWKIFTDCFN CLPVAALIDD RILCMHGGIS PELKSLDQIR
201: NIARPMDIPE SGLVCDLLWS DPSGDVGWGM NDRGVSYTFG ADKVAEFLEK HDMDLICRAH QVVEDGYEFF AERQLVTVFS APNYCGEFDN AGAMMSIDES
301: LMCSFQILKP SEKKSPFL

Arabidopsis Description

TOPP1Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VXL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.