Factsheet for PGSC0003DMT400060162

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
golgi 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g055060.2.1	Tomato	cytosol, nucleus	76.76	97.54
KRG97050	Soybean	cytosol	69.49	88.04
KRG92623	Soybean	cytosol, endoplasmic reticulum	69.25	87.73
KRH68801	Soybean	cytosol, endoplasmic reticulum	68.52	87.62
KRH34158	Soybean	cytosol, nucleus	68.77	87.12
GSMUA_Achr4P29300_001	Banana	cytosol	66.83	86.79
GSMUA_Achr4P25210_001	Banana	cytosol	65.86	85.27
PGSC0003DMT400017290	Potato	cytosol	62.23	84.54
PGSC0003DMT400044371	Potato	cytosol	67.31	84.24
GSMUA_Achr1P01390_001	Banana	cytosol	67.07	84.19
GSMUA_Achr11P...	Banana	cytosol	66.34	84.05
PGSC0003DMT400078199	Potato	cytosol	61.26	81.61
PGSC0003DMT400041996	Potato	cytosol	67.8	81.4
VIT_14s0036g00370.t01	Wine grape	cytosol	68.28	77.69
PGSC0003DMT400053683	Potato	cytosol	47.22	74.71
PGSC0003DMT400063710	Potato	cytosol	54.96	72.06
PGSC0003DMT400057148	Potato	cytosol	34.38	46.56
PGSC0003DMT400058216	Potato	cytosol	33.41	45.1
PGSC0003DMT400013570	Potato	cytosol	33.41	45.1
PGSC0003DMT400004853	Potato	cytosol	33.17	44.77
PGSC0003DMT400081973	Potato	cytosol	33.41	44.09
PGSC0003DMT400079934	Potato	cytosol	33.17	43.91
PGSC0003DMT400039336	Potato	cytosol	30.02	40.92
PGSC0003DMT400069607	Potato	cytosol	30.27	37.31

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102587690	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872
InterPro:IPR029052	UniProt:M1C5B7	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF16891	EnsemblPlantsGene:PGSC0003DMG400023403
PGSC:PGSC0003DMG400023403	EnsemblPlants:PGSC0003DMT400060162	PIRSF:PIRSF033096	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668
PANTHER:PTHR11668:SF390	SMART:SM00156	SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI00029484DA

Description

Serine/threonine-protein phosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400023403]

Coordinates

chr5:-:50771027..50777705

Molecular Weight (calculated)

46987.8 Da

IEP (calculated)

5.331

GRAVY (calculated)

-0.167

Length

413 amino acids

Sequence
(BLAST)

001: MDQNVLDDII TRLLEVKGKP GKQVVLTEAE IKQLCLVAKE TFLRQPNLLE LEAPIKICAG EDCTRILMFC VVSTYVARTL QKCQGIESEE SAQLRFQQFT
101: WLLLGVMKSW CRRIGDIHGQ YSDLLRLFEY GGLPPQSNYL FLGDYVDRGK QSLETICLLL AYKIKYPENF FLLRGNHECA SINRIYGFYD ECKRRFNVRL
201: WKIFTDCFNC LPVAALIDEK ILCMHGGLSP DLNHLDQIRN LQRPTDVPDA GLLCDLLWSD PSKDVQGWGM NDRGVSYTFG ADKVTEFLEK HELDLICRAH
301: QVVEDGYEFF ANRQLVTVFS APNYCGEFDN AGAMMSVDET LMCSFQILKP ADKKSKFSFG STTTAKPGSP TGMKYENQLD AGIKQELLTL EIDVYCSPFL
401: IPKHEKQLHD AGI

Best Arabidopsis Sequence Match ( AT2G29400.1 )
(BLAST)

001: MAEKPAQEQE QKRAMEPAVL DDIIRRLVEF RNTRPGSGKQ VHLSEGEIRQ LCAVSKEIFL QQPNLLELEA PIKICGDIHG QYSDLLRLFE YGGFPPEANY
101: LFLGDYVDRG KQSLETICLL LAYKIKYPEN FFLLRGNHES ASINRIYGFY DECKRRFNVR LWKIFTDCFN CLPVAALIDD RILCMHGGIS PELKSLDQIR
201: NIARPMDIPE SGLVCDLLWS DPSGDVGWGM NDRGVSYTFG ADKVAEFLEK HDMDLICRAH QVVEDGYEFF AERQLVTVFS APNYCGEFDN AGAMMSIDES
301: LMCSFQILKP SEKKSPFL

Arabidopsis Description

TOPP1Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VXL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.