Factsheet for PGSC0003DMT400058216

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400001613

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10430.1	PGSC0003DMT400001613	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g006590.2.1	Tomato	cytosol	99.35	99.35
PGSC0003DMT400004853	Potato	cytosol	97.39	97.39
PGSC0003DMT400013570	Potato	cytosol	97.39	97.39
KRH45793	Soybean	cytosol, nucleus	96.41	96.41
KRH69421	Soybean	cytosol, nucleus	96.08	96.08
KRG99209	Soybean	cytosol, nucleus	95.75	95.75
KRH74722	Soybean	cytosol, nucleus	95.42	95.42
VIT_01s0026g01080.t01	Wine grape	cytosol	94.77	94.77
AT1G10430.1	Thale cress	cytosol	94.77	94.77
CDX93426	Canola	cytosol	94.44	94.44
EER88560	Sorghum	cytosol	94.44	94.44
CDY37977	Canola	cytosol	94.44	94.44
CDY38778	Canola	cytosol	94.12	94.12
CDY34892	Canola	cytosol	94.12	94.12
CDY07799	Canola	cytosol	94.12	94.12
Bra019934.1-P	Field mustard	cytosol	94.12	94.12
Bra016247.1-P	Field mustard	cytosol	94.12	94.12
CDY30909	Canola	cytosol	93.79	93.79
CDY11632	Canola	cytosol	93.79	93.79
Bra031712.1-P	Field mustard	cytosol	93.79	93.79
Zm00001d046369_P002	Maize	cytosol	93.79	93.79
TraesCS6D01G171400.1	Wheat	cytosol	93.46	93.46
TraesCS6B01G213200.1	Wheat	cytosol	93.46	93.46
EES06511	Sorghum	cytosol	93.46	93.46
TraesCS6A01G183700.1	Wheat	cytosol	93.46	93.46
AT1G59830.1	Thale cress	cytosol	93.46	93.46
Os02t0217600-02	Rice	cytosol, plasma membrane	93.46	93.16
CDY52461	Canola	cytosol	93.14	93.14
GSMUA_Achr7P23950_001	Banana	cytosol	93.14	93.14
CDY45151	Canola	cytosol	93.14	93.14
Bra027833.1-P	Field mustard	cytosol	93.14	93.14
Os06t0574500-01	Rice	cytosol, plasma membrane	92.81	92.81
HORVU7Hr1G086410.1	Barley	cytosol	92.81	92.81
TraesCS7D01G358600.1	Wheat	cytosol	92.81	92.81
TraesCS7B01G263500.1	Wheat	cytosol	92.48	92.48
TraesCS7A01G364400.1	Wheat	cytosol	92.16	92.46
AT1G69960.1	Thale cress	cytosol	92.16	91.86
GSMUA_Achr1P11730_001	Banana	cytosol	91.83	91.83
Zm00001d016378_P002	Maize	cytosol	92.81	84.02
Zm00001d036949_P007	Maize	cytosol	83.01	82.47
PGSC0003DMT400081973	Potato	cytosol	80.07	78.27
PGSC0003DMT400079934	Potato	cytosol	79.74	78.21
HORVU6Hr1G038770.1	Barley	cytosol	92.81	74.54
GSMUA_Achr3P20430_001	Banana	plastid	83.99	72.8
PGSC0003DMT400057148	Potato	cytosol	66.01	66.23
Zm00001d053589_P001	Maize	cytosol	63.07	61.27
GSMUA_AchrUn_...	Banana	cytosol	92.48	59.7
PGSC0003DMT400039336	Potato	cytosol	56.86	57.43
PGSC0003DMT400069607	Potato	cytosol	55.56	50.75
PGSC0003DMT400017290	Potato	cytosol	46.08	46.38
PGSC0003DMT400078199	Potato	cytosol	46.08	45.48
PGSC0003DMT400063710	Potato	cytosol	45.75	44.44
PGSC0003DMT400053683	Potato	cytosol	34.97	41.0
PGSC0003DMT400044371	Potato	cytosol	43.46	40.3
PGSC0003DMT400041996	Potato	cytosol	44.44	39.53
PGSC0003DMT400060162	Potato	cytosol	45.1	33.41

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102586640	MapMan:13.4.1.2.3	MapMan:18.4.24.1.2.5	Gene3D:3.60.21.10
InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052
UniProt:M1C2A0	InterPro:Metallo-depent_PP-like	PFAM:PF00149	EnsemblPlantsGene:PGSC0003DMG400022604	PGSC:PGSC0003DMG400022604	EnsemblPlants:PGSC0003DMT400058216
PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF384	SMART:SM00156	SUPFAM:SSF56300
InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000294E674	RefSeq:XP_006357225.1	:	:	:

Description

Serine/threonine-protein phosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400022604]

Coordinates

chr5:+:6559460..6565011

Molecular Weight (calculated)

35050.6 Da

IEP (calculated)

4.629

GRAVY (calculated)

-0.294

Length

306 amino acids

Sequence
(BLAST)

001: MPSHADVDRQ IEQLMECKPL SEAEVKTLCE QARAILVEEW NVQPVKCPVT VCGDIHGQFY DLIELFRIGG NAPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRITI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQI FCLHGGLSPS LDTLDNIRAL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IASQFNHTNG LSLISRAHQL VMEGFNWCQE KNVVTVFSAP NYCYRCGNMA AILEISENME HNFLQFDPAP RQIEPDTTRK
301: TPDYFL

Best Arabidopsis Sequence Match ( AT1G10430.1 )
(BLAST)

001: MPSNGDLDRQ IEQLMECKPL SEADVRTLCD QARAILVEEY NVQPVKCPVT VCGDIHGQFY DLIELFRIGG NAPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRLTI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRSL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAAQFNHNNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENME QNFLQFDPAP RQVEPDTTRK
301: TPDYFL

Arabidopsis Description

PP2A2Serine/threonine-protein phosphatase PP2A-2 catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q07098]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.