CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88112
EES07255

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10430.1	EER88112	AT3G47620.1	21798944
AT1G10430.1	EES07255	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G358600.1	Wheat	cytosol	97.71	97.71
EER88560	Sorghum	cytosol	97.71	97.71
HORVU7Hr1G086410.1	Barley	cytosol	97.71	97.71
TraesCS7B01G263500.1	Wheat	cytosol	97.39	97.39
TraesCS7A01G364400.1	Wheat	cytosol	97.06	97.38
PGSC0003DMT400004853	Potato	cytosol	94.77	94.77
KRH69421	Soybean	cytosol, nucleus	94.44	94.44
KRG99209	Soybean	cytosol, nucleus	94.12	94.12
Solyc05g006590.2.1	Tomato	cytosol	94.12	94.12
KRH45793	Soybean	cytosol, nucleus	94.12	94.12
GSMUA_Achr7P23950_001	Banana	cytosol	93.79	93.79
KRH74722	Soybean	cytosol, nucleus	93.79	93.79
PGSC0003DMT400013570	Potato	cytosol	93.46	93.46
CDY07799	Canola	cytosol	93.46	93.46
PGSC0003DMT400058216	Potato	cytosol	93.46	93.46
CDY34892	Canola	cytosol	93.46	93.46
Solyc01g011340.2.1	Tomato	cytosol, plastid	93.46	93.46
AT1G10430.1	Thale cress	cytosol	93.14	93.14
VIT_17s0000g05330.t01	Wine grape	cytosol	93.14	93.14
Bra031712.1-P	Field mustard	cytosol	93.14	93.14
CDY52461	Canola	cytosol	93.14	93.14
CDX93426	Canola	cytosol	92.81	92.81
CDY30909	Canola	cytosol	92.81	92.81
CDY37977	Canola	cytosol	92.81	92.81
AT1G59830.1	Thale cress	cytosol	92.48	92.48
Bra019934.1-P	Field mustard	cytosol	92.48	92.48
CDY38778	Canola	cytosol	92.16	92.16
CDY11632	Canola	cytosol	92.16	92.16
CDY45151	Canola	cytosol	92.16	92.16
Bra027833.1-P	Field mustard	cytosol	92.16	92.16
VIT_01s0026g01080.t01	Wine grape	cytosol	92.16	92.16
Bra016247.1-P	Field mustard	cytosol	92.16	92.16
AT1G69960.1	Thale cress	cytosol	91.83	91.53
VIT_14s0066g02240.t01	Wine grape	cytosol	90.85	90.85
Zm00001d016378_P002	Maize	cytosol	99.35	89.94
KXG37326	Sorghum	cytosol	79.74	79.48
EER94259	Sorghum	cytosol	77.78	75.56
GSMUA_Achr3P20430_001	Banana	plastid	83.99	72.8
EER98649	Sorghum	cytosol	66.34	66.12
EER95434	Sorghum	plastid	78.76	62.6
GSMUA_AchrUn_...	Banana	cytosol	93.14	60.13
EES01303	Sorghum	cytosol	55.56	56.11
EES13960	Sorghum	cytosol	42.81	42.95
EES02921	Sorghum	cytosol	45.1	42.46
EER95117	Sorghum	cytosol	43.46	41.3
EER89259	Sorghum	cytosol	42.16	39.81
EER90463	Sorghum	cytosol	41.83	36.68
KXG31386	Sorghum	cytosol	42.81	35.69
OQU77459	Sorghum	cytosol	44.44	28.63

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:13.4.1.2.3	MapMan:18.4.24.1.2.5	Gene3D:3.60.21.10	EntrezGene:8073551
UniProt:C5XY23	InterPro:Calcineurin-like_PHP_ApaH	EnsemblPlants:EES06511	ProteinID:EES06511	ProteinID:EES06511.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF248	SMART:SM00156	EnsemblPlantsGene:SORBI_3004G092500
SUPFAM:SSF56300	unigene:Sbi.18647	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0001A85D30	RefSeq:XP_002453535.1	:

Description

hypothetical protein

Coordinates

chr4:-:7869380..7877707

Molecular Weight (calculated)

35085.6 Da

IEP (calculated)

4.611

GRAVY (calculated)

-0.334

Length

306 amino acids

Sequence
(BLAST)

001: MPSHGDLDRQ IAQLRDCKYL PEAEVKALCE QAKAILMEEW NVQPVRCPVT VCGDIHGQFY DLIELFRIGG DAPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRITI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIENQV FCLHGGLSPS LDTLDNIRSL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAQQFNHTNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENMD QNFLQFDPAP RQIEPDTTRK
301: TPDYFL

Best Arabidopsis Sequence Match ( AT1G10430.1 )
(BLAST)

001: MPSNGDLDRQ IEQLMECKPL SEADVRTLCD QARAILVEEY NVQPVKCPVT VCGDIHGQFY DLIELFRIGG NAPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRLTI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRSL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAAQFNHNNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENME QNFLQFDPAP RQVEPDTTRK
301: TPDYFL

Arabidopsis Description

PP2A2Serine/threonine-protein phosphatase PP2A-2 catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q07098]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.