CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d013047_P002	Maize	cytosol, plasma membrane	100.0	100.0
Zm00001d034517_P001	Maize	cytosol, extracellular, mitochondrion	99.67	99.67
Os03t0805300-01	Rice	plasma membrane	99.35	99.35
TraesCS5A01G455000.1	Wheat	cytosol	90.23	97.88
TraesCS5D01G465400.1	Wheat	golgi	97.72	97.72
GSMUA_Achr9P11070_001	Banana	cytosol	89.9	94.52
VIT_06s0004g00830.t01	Wine grape	cytosol	95.11	92.99
AT3G58500.1	Thale cress	cytosol	93.81	92.01
Solyc01g005950.2.1	Tomato	cytosol, extracellular	93.81	92.01
PGSC0003DMT400081973	Potato	cytosol	93.81	92.01
KRG96343	Soybean	cytosol	93.81	92.01
Solyc01g073650.2.1	Tomato	cytosol	93.49	91.99
PGSC0003DMT400079934	Potato	cytosol	93.49	91.99
Bra003340.1-P	Field mustard	cytosol	93.16	91.96
CDY06035	Canola	cytosol	93.49	91.69
Bra007398.1-P	Field mustard	cytosol	93.49	91.69
CDY51518	Canola	cytosol	93.49	91.69
CDY55398	Canola	cytosol	93.49	91.69
Bra014569.1-P	Field mustard	cytosol	93.49	91.69
KRH68078	Soybean	cytosol	93.49	91.69
CDX71949	Canola	cytosol	93.49	91.69
CDX88988	Canola	cytosol	93.49	91.69
KRH58904	Soybean	cytosol	92.83	91.64
KRH42814	Soybean	cytosol	92.83	91.64
Solyc01g034020.2.1	Tomato	cytosol	91.21	91.5
GSMUA_Achr2P12450_001	Banana	cytosol	93.49	91.4
GSMUA_Achr4P28610_001	Banana	cytosol	93.49	91.4
AT2G42500.1	Thale cress	cytosol	93.16	91.37
CDY00569	Canola	cytosol	93.16	91.37
CDX98300	Canola	cytosol	93.16	91.37
CDX67746	Canola	cytosol	59.93	90.64
CDY66916	Canola	cytosol	92.18	90.42
CDY69521	Canola	cytosol	92.18	90.42
CDY47976	Canola	cytosol	91.86	90.1
Bra016870.1-P	Field mustard	cytosol	91.86	90.1
CDY14840	Canola	cytosol	91.86	90.1
KRH71796	Soybean	cytosol	91.86	89.81
KRH38026	Soybean	cytosol	91.86	89.81
EER94259	Sorghum	cytosol	91.86	89.52
HORVU5Hr1G109430.2	Barley	cytosol, plastid	98.05	88.53
TraesCS5B01G464000.1	Wheat	endoplasmic reticulum, plasma membrane	91.21	86.15
GSMUA_Achr4P22190_001	Banana	cytosol	70.36	84.71
GSMUA_Achr8P15360_001	Banana	cytosol	86.97	82.92
Bra000262.1-P	Field mustard	cytosol	86.32	80.55
Bra004705.1-P	Field mustard	cytosol	88.27	80.42
EER88560	Sorghum	cytosol	79.48	79.74
EES06511	Sorghum	cytosol	79.48	79.74
EER95434	Sorghum	plastid	92.83	74.03
VIT_13s0156g00060.t01	Wine grape	cytosol	94.46	72.86
EER98649	Sorghum	cytosol	65.47	65.47
EES01303	Sorghum	cytosol	55.37	56.11
EES13960	Sorghum	cytosol	43.65	43.93
EER95117	Sorghum	cytosol	44.3	42.24
EES02921	Sorghum	cytosol	43.97	41.54
EER89259	Sorghum	cytosol	42.67	40.43
EER90463	Sorghum	cytosol	43.32	38.11
KXG31386	Sorghum	cytosol	43.97	36.78
OQU77459	Sorghum	cytosol	44.63	28.84

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:13.4.1.2.3	MapMan:18.4.24.1.2.5	Gene3D:3.60.21.10	UniProt:A0A1B6QHC8
InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052
EnsemblPlants:KXG37326	ProteinID:KXG37326	ProteinID:KXG37326.1	ProteinID:KXG37327.1	ProteinID:KXG37328.1	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF388	SMART:SM00156
EnsemblPlantsGene:SORBI_3001G049400	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000182BE76	:	:

Description

hypothetical protein

Coordinates

chr1:-:3612338..3616757

Molecular Weight (calculated)

35191.7 Da

IEP (calculated)

4.984

GRAVY (calculated)

-0.386

Length

307 amino acids

Sequence
(BLAST)

001: MSSPHGGLDD QIERLMQCKP LAEPEVRALC EKAKEILMEE SNVQPVKSPV TICGDIHGQF HDLAELFRIG GKCPDTNYLF MGDYVDRGYY SVETVTLLVA
101: LKVRYPQRIT ILRGNHESRQ ITQVYGFYDE CLRKYGNANV WKTFTDLFDY FPLTALVESE IFCLHGGLSP SIETLDNIRN FDRVQEVPHE GPMCDLLWSD
201: PDDRCGWGIS PRGAGYTFGQ DISEQFNHTN SLRLIARAHQ LVMEGFNWAH EQKVVTIFSA PNYCYRCGNM ASILEVDDCR EHTFIQFEPA PRRGEPDVTR
301: RTPDYFL

Best Arabidopsis Sequence Match ( AT3G58500.1 )
(BLAST)

001: MGANSLPTDA TLDLDEQISQ LMQCKPLSEQ QVRALCEKAK EILMDESNVQ PVKSPVTICG DIHGQFHDLA ELFRIGGKCP DTNYLFMGDY VDRGYYSVET
101: VTLLVGLKVR YPQRITILRG NHESRQITQV YGFYDECLRK YGNANVWKIF TDLFDYFPLT ALVESEIFCL HGGLSPSIET LDNIRNFDRV QEVPHEGPMC
201: DLLWSDPDDR CGWGISPRGA GYTFGQDISE QFNHTNNLKL IARAHQLVMD GFNWAHEQKV VTIFSAPNYC YRCGNMASIL EVDDCRNHTF IQFEPAPRRG
301: EPDVTRRTPD YFL

Arabidopsis Description

PP2A4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VCH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.