CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G315000.1	Wheat	cytosol	64.47	69.02
TraesCS5D01G549800.1	Wheat	cytosol	64.18	68.92
TraesCS5B01G565000.1	Wheat	cytosol	63.9	68.4
EES13960	Sorghum	cytosol	59.31	67.87
EER89259	Sorghum	cytosol	61.03	65.74
EER95117	Sorghum	cytosol	60.17	65.22
EES02921	Sorghum	cytosol	57.02	61.23
KXG31386	Sorghum	cytosol	60.46	57.49
EER98649	Sorghum	cytosol	38.4	43.65
KXG37326	Sorghum	cytosol	38.11	43.32
OQU77459	Sorghum	cytosol	58.17	42.74
EER88560	Sorghum	cytosol	36.96	42.16
EES06511	Sorghum	cytosol	36.68	41.83
EER94259	Sorghum	cytosol	37.54	41.59
EES01303	Sorghum	cytosol	35.53	40.92
EER95434	Sorghum	plastid	37.54	34.03

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	UniProt:C5WRV1	InterPro:Calcineurin-like_PHP_ApaH
EnsemblPlants:EER90463	ProteinID:EER90463	ProteinID:EER90463.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721
GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF321	SMART:SM00156
EnsemblPlantsGene:SORBI_3001G002700	SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI00081AC67B	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:258383..260238

Molecular Weight (calculated)

39117.8 Da

IEP (calculated)

7.774

GRAVY (calculated)

-0.261

Length

349 amino acids

Sequence
(BLAST)

001: MEMSRAAVDD MIRRLLVQDA RRGSRQTTQQ QLAEGEIRSL CGAAKEVLMR QANLLELDAP LNICGDVHGQ YRDLLRIFAT AGFPPRSKYL FLGDYVDRGE
101: QSLETICLLL AYKVRYPEHL FLLRGNHECA YINRIYGFYD ECKRRYSVRL WRIFSDCFNC LPVAALVGAR ILCVHGGLSP HLRSLDQIRR LPRPCDVPDQ
201: GLLCDLLWSD PSPLDSGGWA DNEDRGVSCT FGADVVADFL RSHDLDLVCR AHQVVEDGYQ FFAHRQLVTV FSAPNYCGEF DNAGAVMTID ADLVCSFTVI
301: KPAEATDSNK SKKSRGRGRS SSAPPAAPAP PPPSNNSNRI TRKGLLRYW

Best Arabidopsis Sequence Match ( AT1G64040.1 )
(BLAST)

001: MEDSVVDDVI KRLLGAKNGK TTKQVQLTEA EIKHLCSTAK QIFLTQPNLL ELEAPIKICG DTHGQFSDLL RLFEYGGYPP AANYLFLGDY VDRGKQSVET
101: ICLLLAYKIK YKENFFLLRG NHECASINRI YGFYDECKKR YSVRVWKIFT DCFNCLPVAA LIDEKILCMH GGLSPELKHL DEIRNIPRPA DIPDHGLLCD
201: LLWSDPDKDI EGWGENDRGV SYTFGADKVE EFLQTHDLDL ICRAHQVVED GYEFFANRQL VTIFSAPNYC GEFDNAGAMM SVDDSLTCSF QILKASEKKG
301: NFGFGKNAGR RGTPPRKGGG KG

Arabidopsis Description

TOPP3Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178WMA0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.