Factsheet for TraesCS5B01G565000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G315000.1	Wheat	cytosol	98.16	98.16
TraesCS5D01G549800.1	Wheat	cytosol	97.24	97.54
TraesCS4B01G210800.1	Wheat	cytosol	69.94	71.03
TraesCS7B01G025800.1	Wheat	cytosol	69.63	70.72
TraesCS6B01G449000.1	Wheat	cytosol	65.34	70.07
TraesCS6B01G436400.1	Wheat	cytosol	67.79	69.06
TraesCS1B01G128100.1	Wheat	cytosol	65.03	65.23
EER90463	Sorghum	cytosol	68.4	63.9
TraesCS3B01G226800.1	Wheat	cytosol	63.8	59.43
TraesCS3B01G096600.1	Wheat	cytosol	54.6	54.43
TraesCS3B01G096800.1	Wheat	cytosol	53.99	53.99
TraesCS3B01G096100.1	Wheat	cytosol	48.77	51.62
TraesCS5B01G271300.1	Wheat	cytosol	41.41	43.97
TraesCS4B01G283300.2	Wheat	cytosol	41.72	43.45
TraesCS6B01G213200.1	Wheat	cytosol	39.88	42.48
TraesCS7B01G263500.1	Wheat	cytosol	39.57	42.16
TraesCS5B01G173100.1	Wheat	cytosol	39.88	41.27
TraesCS5B01G464000.1	Wheat	endoplasmic reticulum, plasma membrane	39.26	39.38
TraesCS3B01G294200.1	Wheat	cytosol, golgi, plastid	36.2	38.94
TraesCS1B01G393500.1	Wheat	cytosol	35.58	38.03

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674
GO:GO:0003824	GO:GO:0016787	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF16891
PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF321	SMART:SM00156	SUPFAM:SSF56300
InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	EnsemblPlantsGene:TraesCS5B01G565000	EnsemblPlants:TraesCS5B01G565000.1	TIGR:cd07414	SEG:seg

Description

No Description!

Coordinates

chr5B:-:710208847..710210560

Molecular Weight (calculated)

36724.2 Da

IEP (calculated)

7.395

GRAVY (calculated)

-0.183

Length

326 amino acids

Sequence
(BLAST)

001: MNGAALDNVI RRLLEVRRGR PGKQQVQQVQ LGEGEIRQLC AAAKDVFMRQ PNLLQLDAPI KIAGDIHGQY TDLLRLFELG GFPPQHKYLF LGDYVDRGKQ
101: SIETICLLLA YKLRYPEHFF LLRGNHECAS VNRVYGFYDE CKRRYSVRLW RHFSDCFNCM PVAALVESRI LCMHGGLSPD LRHVRDIAGL SRPVDVPDTG
201: LLCDLLWSDP GGAAGWGPNE RGVSYTFGAD VVAAFMERHD LDLVCRAHQV VEDGYEFFAG RRMVTVFSAP NYCGEFDNAG ALMCVDDDLT CSFQILKPVD
301: NRQRRFAFGM GSSATTTSRG IRSPWC

Best Arabidopsis Sequence Match ( AT2G29400.1 )
(BLAST)

001: MAEKPAQEQE QKRAMEPAVL DDIIRRLVEF RNTRPGSGKQ VHLSEGEIRQ LCAVSKEIFL QQPNLLELEA PIKICGDIHG QYSDLLRLFE YGGFPPEANY
101: LFLGDYVDRG KQSLETICLL LAYKIKYPEN FFLLRGNHES ASINRIYGFY DECKRRFNVR LWKIFTDCFN CLPVAALIDD RILCMHGGIS PELKSLDQIR
201: NIARPMDIPE SGLVCDLLWS DPSGDVGWGM NDRGVSYTFG ADKVAEFLEK HDMDLICRAH QVVEDGYEFF AERQLVTVFS APNYCGEFDN AGAMMSIDES
301: LMCSFQILKP SEKKSPFL

Arabidopsis Description

TOPP1Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VXL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.