Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G380200.1 | Wheat | cytosol | 93.44 | 94.06 |
| TraesCS3B01G294200.1 | Wheat | cytosol, golgi, plastid | 89.84 | 90.43 |
| Solyc06g072140.2.1 | Tomato | cytosol | 86.89 | 87.46 |
| PGSC0003DMT400039336 | Potato | cytosol | 86.23 | 86.8 |
| VIT_10s0071g00950.t01 | Wine grape | cytosol | 85.9 | 86.47 |
| Solyc03g019900.2.1 | Tomato | cytosol | 85.9 | 86.47 |
| KRG90576 | Soybean | cytosol, nucleus | 85.9 | 86.47 |
| GSMUA_AchrUn_... | Banana | cytosol | 85.9 | 86.47 |
| CDY33438 | Canola | cytosol | 85.9 | 86.47 |
| AT3G19980.1 | Thale cress | cytosol | 85.57 | 86.14 |
| KRH36174 | Soybean | cytosol, nucleus | 85.57 | 86.14 |
| CDY70204 | Canola | cytosol | 85.57 | 86.14 |
| Bra038247.1-P | Field mustard | cytosol | 85.57 | 86.14 |
| GSMUA_Achr9P21520_001 | Banana | cytosol | 85.25 | 86.09 |
| AT1G50370.1 | Thale cress | cytosol | 85.25 | 85.81 |
| KRH36176 | Soybean | cytosol | 85.25 | 85.81 |
| CDY25366 | Canola | cytosol | 84.92 | 85.48 |
| Bra001770.1-P | Field mustard | cytosol | 84.59 | 85.15 |
| CDX82268 | Canola | cytosol | 84.59 | 85.15 |
| CDY24572 | Canola | cytosol | 84.26 | 84.82 |
| CDY69052 | Canola | cytosol | 86.23 | 83.76 |
| Bra027930.1-P | Field mustard | cytosol | 50.49 | 82.35 |
| HORVU1Hr1G083000.1 | Barley | cytosol | 94.1 | 80.39 |
| CDY03595 | Canola | cytosol | 86.23 | 79.46 |
| TraesCS1A01G373300.1 | Wheat | cytosol | 92.79 | 79.05 |
| PGSC0003DMT400069607 | Potato | cytosol | 86.56 | 78.81 |
| KRH40922 | Soybean | cytosol | 78.36 | 77.85 |
| Bra035830.1-P | Field mustard | cytosol | 84.92 | 76.85 |
| Bra014246.1-P | Field mustard | cytosol | 85.9 | 75.5 |
| TraesCS5B01G173100.1 | Wheat | cytosol | 58.03 | 56.19 |
| TraesCS6B01G213200.1 | Wheat | cytosol | 56.07 | 55.88 |
| TraesCS7B01G263500.1 | Wheat | cytosol | 55.08 | 54.9 |
| TraesCS5B01G271300.1 | Wheat | cytosol | 54.75 | 54.4 |
| TraesCS4B01G283300.2 | Wheat | cytosol | 54.75 | 53.35 |
| TraesCS5B01G464000.1 | Wheat | endoplasmic reticulum, plasma membrane | 53.44 | 50.15 |
| TraesCS1B01G128100.1 | Wheat | cytosol | 40.98 | 38.46 |
| TraesCS6B01G449000.1 | Wheat | cytosol | 37.7 | 37.83 |
| TraesCS6B01G436400.1 | Wheat | cytosol | 39.02 | 37.19 |
| TraesCS4B01G210800.1 | Wheat | cytosol | 39.02 | 37.07 |
| TraesCS7B01G025800.1 | Wheat | cytosol | 38.36 | 36.45 |
| TraesCS5B01G565000.1 | Wheat | cytosol | 38.03 | 35.58 |
| CDY36067 | Canola | plasma membrane | 84.59 | 35.15 |
| TraesCS3B01G096600.1 | Wheat | cytosol | 37.38 | 34.86 |
| TraesCS3B01G226800.1 | Wheat | cytosol | 39.67 | 34.57 |
| TraesCS3B01G096800.1 | Wheat | cytosol | 36.07 | 33.74 |
| TraesCS3B01G096100.1 | Wheat | cytosol | 33.11 | 32.79 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G393500.1 | EnsemblPlantsGene:TraesCS1B01G393500 | Gene3D:3.60.21.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:Calcineurin-like_PHP_ApaH | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like | InterPro:Ser/Thr-sp_prot-phosphatase | KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 |
| PANTHER:PTHR11668 | PANTHER:PTHR11668:SF24 | PFAM:PF00149 | PRINTS:PR00114 | ScanProsite:PS00125 | SMART:SM00156 |
| SUPFAM:SSF56300 | TIGR:cd07415 | MapMan:18.4.24.1.5 | : | : | : |
Description
No Description!
Coordinates
chr1B:-:626230486..626234380
Molecular Weight (calculated)
34846.5 Da
IEP (calculated)
5.196
GRAVY (calculated)
-0.230
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLDLWIVKV KEGQHLAEHE LQSLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFATGGHVPD TNYIFMGDFV DRGFNSLEVF TILLLLKARY
101: PGHITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IINGTVLCVH GGLSPDVRTV DQMRIIDRNC EIPHEGPFCD LMWSDPEEIE
201: TWGVSPRGAG WLFGSRVTTE FNHVNNLELV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFSETMERDV KIFRDGREQP NARAENSSPQ
301: CIRII
101: PGHITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IINGTVLCVH GGLSPDVRTV DQMRIIDRNC EIPHEGPFCD LMWSDPEEIE
201: TWGVSPRGAG WLFGSRVTTE FNHVNNLELV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFSETMERDV KIFRDGREQP NARAENSSPQ
301: CIRII
001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPE TNYIFMGDFV DRGYNSLEVF TILLLLKARH
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINNLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINNLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL
Arabidopsis Description
FYPP1Phytochrome-associated serine/threonine-protein phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX52]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.