Factsheet for TraesCS3B01G226800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1B01G066300.1
TraesCS4A01G246900.1
TraesCS4B01G068000.1
TraesCS4D01G067000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05580.1	TraesCS1B01G066300.1	AT5G52200.1	21798944
AT3G05580.1	TraesCS4A01G246900.1	AT5G52200.1	21798944
AT3G05580.1	TraesCS4B01G068000.1	AT5G52200.1	21798944
AT3G05580.1	TraesCS4D01G067000.1	AT5G52200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G199300.1	Wheat	cytosol	90.29	97.23
Os01t0349400-01	Rice	cytosol	86.29	92.92
TraesCS3A01G195500.1	Wheat	cytosol	91.43	92.49
EES02921	Sorghum	cytosol	84.0	90.46
TraesCS1B01G128100.1	Wheat	cytosol	82.0	88.31
HORVU3Hr1G044550.3	Barley	cytosol	69.43	81.27
GSMUA_Achr11P...	Banana	cytosol	72.29	80.06
GSMUA_Achr2P02240_001	Banana	cytosol	72.57	79.13
GSMUA_Achr8P06590_001	Banana	cytosol	59.71	74.64
CDX86135	Canola	cytosol	53.43	73.62
TraesCS6B01G449000.1	Wheat	cytosol	63.71	73.36
Solyc01g099860.2.1	Tomato	cytosol, unclear	66.0	73.33
PGSC0003DMT400063710	Potato	cytosol	66.0	73.33
CDY05560	Canola	cytosol	65.71	72.33
CDY25019	Canola	cytosol	65.43	72.01
Bra039424.1-P	Field mustard	cytosol	66.0	71.96
Bra001155.1-P	Field mustard	cytosol	65.14	71.7
CDY27754	Canola	cytosol	65.71	71.65
CDY05182	Canola	cytosol	65.71	71.65
AT3G05580.1	Thale cress	cytosol	64.86	71.38
KRH68493	Soybean	cytosol	66.0	71.3
CDX80617	Canola	cytosol	64.86	71.16
Bra040535.1-P	Field mustard	cytosol	64.57	71.07
CDY18815	Canola	cytosol	64.57	71.07
Bra009941.1-P	Field mustard	cytosol	64.57	70.85
GSMUA_Achr11P...	Banana	cytosol	71.43	70.82
TraesCS7B01G025800.1	Wheat	cytosol	64.86	70.72
TraesCS4B01G210800.1	Wheat	cytosol	64.29	70.09
VIT_14s0060g01750.t01	Wine grape	cytosol	64.86	69.85
TraesCS6B01G436400.1	Wheat	cytosol	62.57	68.44
AT5G27840.4	Thale cress	cytosol	64.29	68.18
Zm00001d009181_P005	Maize	cytosol	71.14	67.66
Bra020573.1-P	Field mustard	cytosol	65.43	66.57
TraesCS5B01G565000.1	Wheat	cytosol	59.43	63.8
CDY40717	Canola	cytosol	65.71	63.19
KRG96778	Soybean	nucleus	66.0	61.6
CDX74139	Canola	cytosol	65.43	60.9
TraesCS3B01G096800.1	Wheat	cytosol	47.14	50.61
TraesCS3B01G096600.1	Wheat	cytosol	47.14	50.46
TraesCS3B01G096100.1	Wheat	cytosol	41.71	47.4
TraesCS6B01G213200.1	Wheat	cytosol	40.29	46.08
TraesCS7B01G263500.1	Wheat	cytosol	40.0	45.75
TraesCS5B01G271300.1	Wheat	cytosol	39.71	45.28
TraesCS5B01G173100.1	Wheat	cytosol	40.0	44.44
TraesCS4B01G283300.2	Wheat	cytosol	39.14	43.77
TraesCS3B01G294200.1	Wheat	cytosol, golgi, plastid	35.43	40.92
TraesCS5B01G464000.1	Wheat	endoplasmic reticulum, plasma membrane	37.71	40.62
TraesCS1B01G393500.1	Wheat	cytosol	34.57	39.67

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674
GO:GO:0003824	GO:GO:0016787	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF16891
PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF305	SMART:SM00156	SUPFAM:SSF56300
InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	EnsemblPlantsGene:TraesCS3B01G226800	EnsemblPlants:TraesCS3B01G226800.1	TIGR:cd07414	SEG:seg

Description

No Description!

Coordinates

chr3B:-:317624176..317626595

Molecular Weight (calculated)

39288.2 Da

IEP (calculated)

5.134

GRAVY (calculated)

-0.155

Length

350 amino acids

Sequence
(BLAST)

001: MTRASMGAMD GAALDEVVRR LVEGGRGGRQ VQLSEAEIRQ LCVEAKRVLL SQPNLLRIPA PVKICGDIHG QFVDLLRLFD LGGYPPTSTY LFLGDYVDRG
101: KQSLETICLL LAYKVKYPDK VFLLRGNHED AKINRVYGFY DECKRRFNVR LWKIFCDCFN CLPMAALIDD KIFCMHGGLS PELNSLDQIK DIERPVEIPD
201: YGLLCDLLWS DPSSDTQGWG ESDRGVACTF GADKLVEFLE KNDLDLICRA HQVVEDGYEF FAERRLVTIF SAPNYCGEFD NAGALLSIDE SLMCSFQILK
301: PKETGAPHSR KPISNKVNNQ ASVGFPFMTQ YIGQVTDRPS VSCSCLNYNS

Best Arabidopsis Sequence Match ( AT5G27840.4 )
(BLAST)

001: MMTSMEGMVE KGVLDDIIRR LLEGKGGKQV QLSESEIRQL CFNARQIFLS QPNLLDLHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI YLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKVFTDCFNC LPVAALIDEK ILCMHGGLSP DLDNLNQIRE IQRPIEIPDS
201: GLLCDLLWSD PDQKIEGWAD SDRGISCTFG ADKVAEFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDES LVCSFEIMKP
301: APASSSHPLK KVSFYQRYID LSPSYNTILL

Arabidopsis Description

TOPP8Calcineurin-like metallo-phosphoesterase superfamily protein [Source:TAIR;Acc:AT5G27840]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.