Factsheet for GSMUA_Achr11P13900_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr6P26070_001
GSMUA_Achr9P05730_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05580.1	GSMUA_Achr6P26070_001	AT5G52200.1	21798944
AT3G05580.1	GSMUA_Achr9P05730_001	AT5G52200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P02240_001	Banana	cytosol	93.35	91.9
TraesCS1A01G095500.1	Wheat	cytosol	81.01	78.77
TraesCS1B01G128100.1	Wheat	cytosol	81.01	78.77
TraesCS1D01G104400.1	Wheat	cytosol	81.01	78.77
Zm00001d037601_P001	Maize	cytosol	73.73	77.67
Os01t0349400-01	Rice	cytosol	79.75	77.54
TraesCS3D01G199300.1	Wheat	cytosol	79.75	77.54
HORVU1Hr1G022370.5	Barley	cytosol	79.43	76.99
GSMUA_Achr8P06590_001	Banana	cytosol	67.41	76.07
AT3G05580.1	Thale cress	cytosol	75.95	75.47
EES02921	Sorghum	cytosol	77.22	75.08
CDY25019	Canola	cytosol	75.32	74.84
Bra039424.1-P	Field mustard	cytosol	75.95	74.77
CDY27754	Canola	cytosol	75.95	74.77
CDY05182	Canola	cytosol	75.95	74.77
CDY05560	Canola	cytosol	75.0	74.53
CDX86135	Canola	cytosol	59.81	74.41
CDX80617	Canola	cytosol	75.0	74.29
Bra001155.1-P	Field mustard	cytosol	74.68	74.21
Bra009941.1-P	Field mustard	cytosol	74.68	73.98
GSMUA_Achr11P...	Banana	cytosol	82.28	73.65
Bra040535.1-P	Field mustard	cytosol	74.05	73.58
CDY18815	Canola	cytosol	74.05	73.58
KRH68493	Soybean	cytosol	75.0	73.15
Zm00001d009844_P001	Maize	cytosol	78.16	73.08
Solyc01g099860.2.1	Tomato	cytosol, unclear	72.78	73.02
PGSC0003DMT400063710	Potato	cytosol	72.78	73.02
VIT_14s0060g01750.t01	Wine grape	cytosol	75.0	72.92
TraesCS3A01G195500.1	Wheat	cytosol	79.43	72.54
TraesCS3B01G226800.1	Wheat	cytosol	80.06	72.29
GSMUA_Achr8P19510_001	Banana	cytosol	63.61	72.04
GSMUA_Achr4P09690_001	Banana	cytosol	68.99	70.78
AT5G27840.4	Thale cress	cytosol	73.42	70.3
GSMUA_Achr4P25210_001	Banana	cytosol	70.89	70.22
GSMUA_Achr4P29300_001	Banana	cytosol	70.57	70.13
GSMUA_Achr8P24570_001	Banana	cytosol	67.41	69.61
GSMUA_Achr2P04120_001	Banana	cytosol	66.46	69.08
GSMUA_Achr10P...	Banana	cytosol	69.94	69.06
GSMUA_Achr11P...	Banana	cytosol	70.89	68.71
GSMUA_Achr1P01390_001	Banana	cytosol	70.57	67.78
Bra020573.1-P	Field mustard	cytosol	73.73	67.73
GSMUA_Achr2P15380_001	Banana	cytosol	68.35	67.71
CDY40717	Canola	cytosol	75.32	65.38
HORVU3Hr1G044550.3	Barley	cytosol	61.71	65.22
KRG96778	Soybean	nucleus	75.32	63.47
CDX74139	Canola	cytosol	75.0	63.03
GSMUA_Achr7P10840_001	Banana	cytosol	63.61	62.81
Zm00001d009181_P005	Maize	cytosol	65.51	56.25
OQU77459	Sorghum	cytosol	79.43	52.84
GSMUA_Achr4P31160_001	Banana	cytosol	69.3	50.58
GSMUA_Achr9P11070_001	Banana	cytosol	42.72	46.23
GSMUA_Achr7P23950_001	Banana	cytosol	44.62	46.08
GSMUA_Achr7P06210_001	Banana	cytosol	43.99	45.72
GSMUA_Achr1P11730_001	Banana	cytosol	43.99	45.42
GSMUA_Achr2P12450_001	Banana	cytosol	43.99	44.27
GSMUA_Achr1P09340_001	Banana	cytosol	42.72	44.26
GSMUA_Achr4P28610_001	Banana	cytosol	43.67	43.95
GSMUA_Achr8P15360_001	Banana	cytosol	43.99	43.17
GSMUA_AchrUn_...	Banana	cytosol	40.51	42.24
GSMUA_Achr9P21520_001	Banana	cytosol	39.87	41.72
GSMUA_Achr4P22190_001	Banana	cytosol	31.01	38.43
GSMUA_Achr3P20430_001	Banana	plastid	41.46	37.11
GSMUA_AchrUn_...	Banana	cytosol	45.25	30.17

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr11G13900_001
EnsemblPlants:GSMUA_Achr11P13900_001	EnsemblPlants:GSMUA_Achr11T13900_001	InterPro:IPR029052	UniProt:M0RS20	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PFAM:PF16891	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF262	SMART:SM00156
SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0002966D81	:	:

Description

Serine/threonine-protein phosphatase PP1 isozyme 9 [Source:GMGC_GENE;Acc:GSMUA_Achr11G13900_001]

Coordinates

chr11:+:14944876..14953311

Molecular Weight (calculated)

35668.1 Da

IEP (calculated)

5.009

GRAVY (calculated)

-0.065

Length

316 amino acids

Sequence
(BLAST)

001: MGAMEGPVLD DVIRRLLGGG GRQVKLFEAE IRQLCVEAKK VFLSQPNLLE LHAPIKICGD IHGQYIDLLR FFEIGGFPPH SSYLFLGDYV DRGKYSLETI
101: CLLLAYKIKY PDKVFLLRGN HEDAKINRVY GFYDECKRRF NIRLWKTFCD CFNCLPLAAL IDEKILCMHG GLSPELENID QIRDISRPTE IPDYGLLCDL
201: LWSDPDSDVQ GWGESDRGVS VTFGADKLVE FLEKNDLDLI CRAHQVVEDG YEFFAHRRLV TIFSAPNYCG EFDNVGALLS IDENLLCSFE ILKVATPGSF
301: DALAKIPNKP SKGGKV

Best Arabidopsis Sequence Match ( AT3G05580.1 )
(BLAST)

001: MMTSMEGMME MGVLDDIIRR LLEGKGGKQV QLSEVEIRQL CVNARQIFLS QPNLLELHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVAALIDEK ILCMHGGLSP ELENLGQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKNEGWTD SDRGISCTFG ADVVADFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APASSTNPLK KVPKMGKS

Arabidopsis Description

TOPP9Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VKY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.