Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G128100.1 | Wheat | cytosol | 99.38 | 99.38 |
| TraesCS1A01G095500.1 | Wheat | cytosol | 99.38 | 99.38 |
| HORVU1Hr1G022370.5 | Barley | cytosol | 96.31 | 96.01 |
| Zm00001d037601_P001 | Maize | cytosol | 83.69 | 90.67 |
| TraesCS3D01G199300.1 | Wheat | cytosol | 87.69 | 87.69 |
| Zm00001d009844_P001 | Maize | cytosol | 90.77 | 87.28 |
| GSMUA_Achr11P... | Banana | cytosol | 78.77 | 81.01 |
| GSMUA_Achr2P02240_001 | Banana | cytosol | 78.46 | 79.44 |
| PGSC0003DMT400063710 | Potato | cytosol | 72.92 | 75.24 |
| Solyc01g099860.2.1 | Tomato | cytosol, unclear | 72.92 | 75.24 |
| AT3G05580.1 | Thale cress | cytosol | 72.62 | 74.21 |
| Bra039424.1-P | Field mustard | cytosol | 73.23 | 74.14 |
| CDX86135 | Canola | cytosol | 57.85 | 74.02 |
| CDY25019 | Canola | cytosol | 72.31 | 73.9 |
| Bra001155.1-P | Field mustard | cytosol | 72.31 | 73.9 |
| CDY27754 | Canola | cytosol | 72.92 | 73.83 |
| CDY05182 | Canola | cytosol | 72.92 | 73.83 |
| CDY05560 | Canola | cytosol | 72.0 | 73.58 |
| CDY18815 | Canola | cytosol | 71.69 | 73.27 |
| Bra040535.1-P | Field mustard | cytosol | 71.69 | 73.27 |
| GSMUA_Achr8P06590_001 | Banana | cytosol | 63.08 | 73.21 |
| KRH68493 | Soybean | cytosol | 72.92 | 73.15 |
| CDX80617 | Canola | cytosol | 71.69 | 73.04 |
| TraesCS6D01G388000.1 | Wheat | cytosol | 68.31 | 73.03 |
| Bra009941.1-P | Field mustard | cytosol | 71.38 | 72.73 |
| VIT_14s0060g01750.t01 | Wine grape | cytosol | 71.38 | 71.38 |
| TraesCS4D01G211500.1 | Wheat | cytosol | 68.92 | 69.78 |
| TraesCS7D01G124400.1 | Wheat | cytosol | 68.92 | 69.78 |
| GSMUA_Achr11P... | Banana | cytosol | 75.69 | 69.69 |
| AT5G27840.4 | Thale cress | cytosol | 70.15 | 69.09 |
| TraesCS6D01G381300.1 | Wheat | cytosol | 65.85 | 67.72 |
| Bra020573.1-P | Field mustard | cytosol | 71.08 | 67.15 |
| CDY40717 | Canola | cytosol | 72.92 | 65.11 |
| TraesCS5D01G549800.1 | Wheat | cytosol | 64.92 | 64.92 |
| KRG96778 | Soybean | nucleus | 72.92 | 63.2 |
| CDX74139 | Canola | cytosol | 72.62 | 62.77 |
| OQU77459 | Sorghum | cytosol | 91.38 | 62.53 |
| TraesCS5D01G278600.1 | Wheat | cytosol | 42.15 | 46.13 |
| TraesCS6D01G171400.1 | Wheat | cytosol | 43.08 | 45.75 |
| TraesCS7D01G358600.1 | Wheat | cytosol | 42.77 | 45.42 |
| TraesCS5D01G465400.1 | Wheat | golgi | 42.77 | 45.28 |
| TraesCS5D01G180100.1 | Wheat | cytosol | 42.77 | 45.28 |
| TraesCS4D01G282100.1 | Wheat | cytosol | 42.15 | 43.77 |
| TraesCS3D01G261300.1 | Wheat | cytosol | 39.38 | 42.24 |
| TraesCS1D01G380200.1 | Wheat | cytosol | 38.77 | 41.58 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G104400.1 | EnsemblPlantsGene:TraesCS1D01G104400 | Gene3D:3.60.21.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:Calcineurin-like_PHP_ApaH | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like | InterPro:STPPase_N | InterPro:Ser/Thr-sp_prot-phosphatase | KEGG:04658+3.1.3.16 |
| KEGG:04660+3.1.3.16 | PANTHER:PTHR11668 | PANTHER:PTHR11668:SF305 | PFAM:PF00149 | PFAM:PF16891 | PRINTS:PR00114 |
| ScanProsite:PS00125 | SEG:seg | SMART:SM00156 | SUPFAM:SSF56300 | MapMan:18.4.24.1.1 | : |
Description
No Description!
Coordinates
chr1D:+:95864090..95869336
Molecular Weight (calculated)
36525.0 Da
IEP (calculated)
4.904
GRAVY (calculated)
-0.148
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMTRASMGA MEGAALDEVV RRLVEGGRGG RQVQLSEAEI RQLCVDAKRV FLSQPNLLRI QAPVKICGDI HGQFVDLLRL FDLGGYPPTS TYVFLGDYVD
101: RGKQSLETIC LLLAYKIRYP DKVFLLRGNH EDAKINRVYG FYDECKRRFN VRLWKIFSDC FNCLPIAALI DDKILCMHGG LSPELTNLDQ IKDIERPAEI
201: PDYGLLCDLL WSDPSPDGEG WGESDRGVSC TFGADMLIEF LEKNDLDLIC RAHQVVEDGY EFFAQRRLVT IFSAPNYCGE FDNVGALLSI DENLMCSFQI
301: LKPNETGTSR VKRQIPNKPA TGGSA
101: RGKQSLETIC LLLAYKIRYP DKVFLLRGNH EDAKINRVYG FYDECKRRFN VRLWKIFSDC FNCLPIAALI DDKILCMHGG LSPELTNLDQ IKDIERPAEI
201: PDYGLLCDLL WSDPSPDGEG WGESDRGVSC TFGADMLIEF LEKNDLDLIC RAHQVVEDGY EFFAQRRLVT IFSAPNYCGE FDNVGALLSI DENLMCSFQI
301: LKPNETGTSR VKRQIPNKPA TGGSA
001: MMTSMEGMME MGVLDDIIRR LLEGKGGKQV QLSEVEIRQL CVNARQIFLS QPNLLELHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVAALIDEK ILCMHGGLSP ELENLGQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKNEGWTD SDRGISCTFG ADVVADFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APASSTNPLK KVPKMGKS
101: QSLETICLLL AYKIRYPSKI FLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKIFTDCFNC LPVAALIDEK ILCMHGGLSP ELENLGQIRE IQRPTEIPDN
201: GLLCDLLWSD PDQKNEGWTD SDRGISCTFG ADVVADFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDQS LVCSFEILKP
301: APASSTNPLK KVPKMGKS
Arabidopsis Description
TOPP9Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VKY6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.