Factsheet for TraesCS5D01G549800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G315000.1	Wheat	cytosol	99.08	98.77
TraesCS5B01G565000.1	Wheat	cytosol	97.54	97.24
TraesCS4D01G211500.1	Wheat	cytosol	71.08	71.96
TraesCS7D01G124400.1	Wheat	cytosol	69.54	70.41
TraesCS6D01G388000.1	Wheat	cytosol	65.85	70.39
TraesCS6D01G381300.1	Wheat	cytosol	68.0	69.94
TraesCS1D01G104400.1	Wheat	cytosol	64.92	64.92
EER90463	Sorghum	cytosol	68.92	64.18
TraesCS3D01G199300.1	Wheat	cytosol	63.38	63.38
TraesCS5D01G465400.1	Wheat	golgi	41.85	44.3
TraesCS5D01G278600.1	Wheat	cytosol	40.31	44.11
TraesCS6D01G171400.1	Wheat	cytosol	40.92	43.46
TraesCS4D01G282100.1	Wheat	cytosol	41.85	43.45
TraesCS7D01G358600.1	Wheat	cytosol	40.62	43.14
TraesCS5D01G180100.1	Wheat	cytosol	40.62	43.0
TraesCS3D01G261300.1	Wheat	cytosol	36.31	38.94
TraesCS1D01G380200.1	Wheat	cytosol	36.0	38.61

Protein Annotations

EnsemblPlants:TraesCS5D01G549800.1	EnsemblPlantsGene:TraesCS5D01G549800	Gene3D:3.60.21.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
InterPro:Calcineurin-like_PHP_ApaH	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	KEGG:04658+3.1.3.16
KEGG:04660+3.1.3.16	PANTHER:PTHR11668	PANTHER:PTHR11668:SF321	PFAM:PF00149	PFAM:PF16891	PRINTS:PR00114
ScanProsite:PS00125	SEG:seg	SMART:SM00156	SUPFAM:SSF56300	MapMan:18.4.24.1.1	:

Description

No Description!

Coordinates

chr5D:-:556618323..556619774

Molecular Weight (calculated)

36688.1 Da

IEP (calculated)

7.413

GRAVY (calculated)

-0.205

Length

325 amino acids

Sequence
(BLAST)

001: MNGAALDNVI RRLLEVRRGR PGKQQVQQVQ LGEGEIRQLC GAAKDVFMRQ PNLLQLDAPI KIAGDIHGQY TDLIRLFELG GFPPQHKYLF LGDYVDRGKQ
101: SIETICLLLA YKLRYPEHFF LLRGNHECAS VNRVYGFYDE CKRRYSVRLW RHFSDCFNCM PVAALIESRI LCMHGGLSPD LRHIRDIAGL PRPVDVPDTG
201: LLCDLLWSDP GGAAGWGPNE RGVSYTFGAD VVAAFMERHD LDLVCRAHQV VEDGYEFFAG RRMVTVFSAP NYCGEFDNAG ALMCVDDDLT CSFQILKPAD
301: NRQRRFAFGM GSSATTSRGV RSPWW

Best Arabidopsis Sequence Match ( AT2G29400.1 )
(BLAST)

001: MAEKPAQEQE QKRAMEPAVL DDIIRRLVEF RNTRPGSGKQ VHLSEGEIRQ LCAVSKEIFL QQPNLLELEA PIKICGDIHG QYSDLLRLFE YGGFPPEANY
101: LFLGDYVDRG KQSLETICLL LAYKIKYPEN FFLLRGNHES ASINRIYGFY DECKRRFNVR LWKIFTDCFN CLPVAALIDD RILCMHGGIS PELKSLDQIR
201: NIARPMDIPE SGLVCDLLWS DPSGDVGWGM NDRGVSYTFG ADKVAEFLEK HDMDLICRAH QVVEDGYEFF AERQLVTVFS APNYCGEFDN AGAMMSIDES
301: LMCSFQILKP SEKKSPFL

Arabidopsis Description

TOPP1Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VXL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.