Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0349400-01 | Rice | cytosol | 93.54 | 93.54 |
| EES02921 | Sorghum | cytosol | 91.38 | 91.38 |
| TraesCS3A01G195500.1 | Wheat | cytosol | 97.23 | 91.33 |
| TraesCS3B01G226800.1 | Wheat | cytosol | 97.23 | 90.29 |
| TraesCS1D01G104400.1 | Wheat | cytosol | 87.69 | 87.69 |
| HORVU3Hr1G044550.3 | Barley | cytosol | 74.77 | 81.27 |
| GSMUA_Achr11P... | Banana | cytosol | 77.54 | 79.75 |
| GSMUA_Achr2P02240_001 | Banana | cytosol | 77.85 | 78.82 |
| GSMUA_Achr8P06590_001 | Banana | cytosol | 64.62 | 75.0 |
| Solyc01g099860.2.1 | Tomato | cytosol, unclear | 71.38 | 73.65 |
| PGSC0003DMT400063710 | Potato | cytosol | 71.38 | 73.65 |
| CDX86135 | Canola | cytosol | 57.54 | 73.62 |
| TraesCS6D01G388000.1 | Wheat | cytosol | 68.62 | 73.36 |
| CDY05560 | Canola | cytosol | 71.08 | 72.64 |
| CDY25019 | Canola | cytosol | 70.77 | 72.33 |
| Bra039424.1-P | Field mustard | cytosol | 71.08 | 71.96 |
| AT3G05580.1 | Thale cress | cytosol | 70.15 | 71.7 |
| Bra001155.1-P | Field mustard | cytosol | 70.15 | 71.7 |
| CDY27754 | Canola | cytosol | 70.77 | 71.65 |
| CDY05182 | Canola | cytosol | 70.77 | 71.65 |
| KRH68493 | Soybean | cytosol | 71.38 | 71.6 |
| CDX80617 | Canola | cytosol | 70.15 | 71.47 |
| Bra009941.1-P | Field mustard | cytosol | 69.85 | 71.16 |
| Bra040535.1-P | Field mustard | cytosol | 69.54 | 71.07 |
| CDY18815 | Canola | cytosol | 69.54 | 71.07 |
| TraesCS7D01G124400.1 | Wheat | cytosol | 70.15 | 71.03 |
| GSMUA_Achr11P... | Banana | cytosol | 76.62 | 70.54 |
| TraesCS4D01G211500.1 | Wheat | cytosol | 69.23 | 70.09 |
| VIT_14s0060g01750.t01 | Wine grape | cytosol | 69.85 | 69.85 |
| TraesCS6D01G381300.1 | Wheat | cytosol | 67.69 | 69.62 |
| AT5G27840.4 | Thale cress | cytosol | 69.54 | 68.48 |
| Zm00001d009181_P005 | Maize | cytosol | 77.23 | 68.21 |
| Bra020573.1-P | Field mustard | cytosol | 70.77 | 66.86 |
| TraesCS5D01G549800.1 | Wheat | cytosol | 63.38 | 63.38 |
| CDY40717 | Canola | cytosol | 70.77 | 63.19 |
| KRG96778 | Soybean | nucleus | 71.38 | 61.87 |
| CDX74139 | Canola | cytosol | 70.46 | 60.9 |
| TraesCS5D01G278600.1 | Wheat | cytosol | 42.77 | 46.8 |
| TraesCS6D01G171400.1 | Wheat | cytosol | 43.08 | 45.75 |
| TraesCS7D01G358600.1 | Wheat | cytosol | 42.77 | 45.42 |
| TraesCS5D01G180100.1 | Wheat | cytosol | 42.77 | 45.28 |
| TraesCS5D01G465400.1 | Wheat | golgi | 42.77 | 45.28 |
| TraesCS4D01G282100.1 | Wheat | cytosol | 41.85 | 43.45 |
| TraesCS3D01G261300.1 | Wheat | cytosol | 37.85 | 40.59 |
| TraesCS1D01G380200.1 | Wheat | cytosol | 37.54 | 40.26 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.1.1 | Gene3D:3.60.21.10 | InterPro:Calcineurin-like_PHP_ApaH | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0016787 | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like | PFAM:PF00149 | PFAM:PF16891 |
| PRINTS:PR00114 | ScanProsite:PS00125 | PANTHER:PTHR11668 | PANTHER:PTHR11668:SF305 | SMART:SM00156 | SUPFAM:SSF56300 |
| InterPro:STPPase_N | InterPro:Ser/Thr-sp_prot-phosphatase | EnsemblPlantsGene:TraesCS3D01G199300 | EnsemblPlants:TraesCS3D01G199300.1 | TIGR:cd07414 | SEG:seg |
Description
No Description!
Coordinates
chr3D:+:223466411..223477110
Molecular Weight (calculated)
36496.0 Da
IEP (calculated)
4.910
GRAVY (calculated)
-0.119
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMTRASMGA MDGAALDEVV RRLVEVGRGG RQVQLSEAEI RQLCVEAKTV LLSQPNLLRI PAPVKICGDI HGQFVDLLRL FDLGGYPPTS TYLFLGDYVD
101: RGKQSLETIC LLLAYKVKYP DKVFLLRGNH EDAKINRVYG FYDECKRRFN VRLWKIFCDC FNCLPMAALI DDKIFCMHGG LSPELNSLDQ IKDIERPVEI
201: PDYGLLCDLL WSDPSSDTQG WGESDRGVAC TFGADKLVEF LEKNDLDLIC RAHQVVEDGY EFFAERRLVT IFSAPNYCGE FDNAGALLSI DESLMCSFQI
301: LKPKETGAPH SRKPISNKAP TVDNA
101: RGKQSLETIC LLLAYKVKYP DKVFLLRGNH EDAKINRVYG FYDECKRRFN VRLWKIFCDC FNCLPMAALI DDKIFCMHGG LSPELNSLDQ IKDIERPVEI
201: PDYGLLCDLL WSDPSSDTQG WGESDRGVAC TFGADKLVEF LEKNDLDLIC RAHQVVEDGY EFFAERRLVT IFSAPNYCGE FDNAGALLSI DESLMCSFQI
301: LKPKETGAPH SRKPISNKAP TVDNA
001: MMTSMEGMVE KGVLDDIIRR LLEGKGGKQV QLSESEIRQL CFNARQIFLS QPNLLDLHAP IRICGDIHGQ YQDLLRLFEY GGYPPSANYL FLGDYVDRGK
101: QSLETICLLL AYKIRYPSKI YLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKVFTDCFNC LPVAALIDEK ILCMHGGLSP DLDNLNQIRE IQRPIEIPDS
201: GLLCDLLWSD PDQKIEGWAD SDRGISCTFG ADKVAEFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDES LVCSFEIMKP
301: APASSSHPLK KVSFYQRYID LSPSYNTILL
101: QSLETICLLL AYKIRYPSKI YLLRGNHEDA KINRIYGFYD ECKRRFNVRL WKVFTDCFNC LPVAALIDEK ILCMHGGLSP DLDNLNQIRE IQRPIEIPDS
201: GLLCDLLWSD PDQKIEGWAD SDRGISCTFG ADKVAEFLDK NDLDLICRGH QVVEDGYEFF AKRRLVTIFS APNYGGEFDN AGALLSVDES LVCSFEIMKP
301: APASSSHPLK KVSFYQRYID LSPSYNTILL
Arabidopsis Description
TOPP8Calcineurin-like metallo-phosphoesterase superfamily protein [Source:TAIR;Acc:AT5G27840]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.