Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G183700.1 | Wheat | cytosol | 100.0 | 100.0 |
| TraesCS6B01G213200.1 | Wheat | cytosol | 100.0 | 100.0 |
| Os02t0217600-02 | Rice | cytosol, plasma membrane | 97.39 | 97.07 |
| TraesCS7D01G358600.1 | Wheat | cytosol | 95.42 | 95.42 |
| KRH69421 | Soybean | cytosol, nucleus | 94.12 | 94.12 |
| PGSC0003DMT400058216 | Potato | cytosol | 93.46 | 93.46 |
| PGSC0003DMT400004853 | Potato | cytosol | 93.46 | 93.46 |
| KRH74722 | Soybean | cytosol, nucleus | 93.46 | 93.46 |
| Solyc05g006590.2.1 | Tomato | cytosol | 93.46 | 93.46 |
| KRH45793 | Soybean | cytosol, nucleus | 93.14 | 93.14 |
| CDY07799 | Canola | cytosol | 93.14 | 93.14 |
| CDY34892 | Canola | cytosol | 93.14 | 93.14 |
| GSMUA_Achr7P23950_001 | Banana | cytosol | 93.14 | 93.14 |
| Solyc01g011340.2.1 | Tomato | cytosol, plastid | 92.81 | 92.81 |
| PGSC0003DMT400013570 | Potato | cytosol | 92.81 | 92.81 |
| CDY52461 | Canola | cytosol | 92.81 | 92.81 |
| CDY37977 | Canola | cytosol | 92.81 | 92.81 |
| CDX93426 | Canola | cytosol | 92.81 | 92.81 |
| Bra031712.1-P | Field mustard | cytosol | 92.81 | 92.81 |
| VIT_17s0000g05330.t01 | Wine grape | cytosol | 92.81 | 92.81 |
| KRG99209 | Soybean | cytosol, nucleus | 92.48 | 92.48 |
| Bra019934.1-P | Field mustard | cytosol | 92.48 | 92.48 |
| CDY38778 | Canola | cytosol | 91.83 | 91.83 |
| CDY30909 | Canola | cytosol | 91.83 | 91.83 |
| CDY11632 | Canola | cytosol | 91.83 | 91.83 |
| VIT_01s0026g01080.t01 | Wine grape | cytosol | 91.83 | 91.83 |
| Bra016247.1-P | Field mustard | cytosol | 91.83 | 91.83 |
| AT1G10430.1 | Thale cress | cytosol | 91.83 | 91.83 |
| AT1G59830.1 | Thale cress | cytosol | 91.5 | 91.5 |
| AT1G69960.1 | Thale cress | cytosol | 91.5 | 91.21 |
| Bra027833.1-P | Field mustard | cytosol | 91.18 | 91.18 |
| CDY45151 | Canola | cytosol | 91.18 | 91.18 |
| VIT_14s0066g02240.t01 | Wine grape | cytosol | 90.52 | 90.52 |
| TraesCS5D01G465400.1 | Wheat | golgi | 80.07 | 79.8 |
| HORVU6Hr1G038770.1 | Barley | cytosol | 99.35 | 79.79 |
| TraesCS5D01G278600.1 | Wheat | cytosol | 75.82 | 78.11 |
| TraesCS4D01G282100.1 | Wheat | cytosol | 78.1 | 76.36 |
| GSMUA_Achr3P20430_001 | Banana | plastid | 83.01 | 71.95 |
| TraesCS5D01G180100.1 | Wheat | cytosol | 65.36 | 65.15 |
| Zm00001d053589_P001 | Maize | cytosol | 66.01 | 64.13 |
| GSMUA_AchrUn_... | Banana | cytosol | 92.48 | 59.7 |
| TraesCS3D01G261300.1 | Wheat | cytosol | 56.86 | 57.43 |
| TraesCS1D01G380200.1 | Wheat | cytosol | 56.54 | 57.1 |
| TraesCS6D01G388000.1 | Wheat | cytosol | 43.79 | 44.08 |
| TraesCS1D01G104400.1 | Wheat | cytosol | 45.75 | 43.08 |
| TraesCS3D01G199300.1 | Wheat | cytosol | 45.75 | 43.08 |
| TraesCS6D01G381300.1 | Wheat | cytosol | 43.46 | 42.09 |
| TraesCS4D01G211500.1 | Wheat | cytosol | 43.79 | 41.74 |
| TraesCS7D01G124400.1 | Wheat | cytosol | 43.46 | 41.43 |
| TraesCS5D01G549800.1 | Wheat | cytosol | 43.46 | 40.92 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G171400.1 | EnsemblPlantsGene:TraesCS6D01G171400 | Gene3D:3.60.21.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:Calcineurin-like_PHP_ApaH | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like | InterPro:Ser/Thr-sp_prot-phosphatase | KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 |
| PANTHER:PTHR11668 | PANTHER:PTHR11668:SF248 | PFAM:PF00149 | PRINTS:PR00114 | ScanProsite:PS00125 | SMART:SM00156 |
| SUPFAM:SSF56300 | TIGR:cd07415 | MapMan:13.4.1.2.3 | MapMan:18.4.24.1.2.5 | : | : |
Description
No Description!
Coordinates
chr6D:-:157815113..157819234
Molecular Weight (calculated)
35101.7 Da
IEP (calculated)
4.847
GRAVY (calculated)
-0.348
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPHGDLDRQ IAHLRECKHL PEAEVKGLCE QAKAILMEEW NVQPVRCPVT VCGDIHGQFY DLIELFRIGG ESPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRITI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIENQV FCLHGGLSPS LDTLDNIRAL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAQQFNHTNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENMD HNFLQFDPAP RQIEPDTTRK
301: TPDYFL
101: KVRYRDRITI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIENQV FCLHGGLSPS LDTLDNIRAL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAQQFNHTNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENMD HNFLQFDPAP RQIEPDTTRK
301: TPDYFL
001: MPSNGDLDRQ IEQLMECKPL SEADVRTLCD QARAILVEEY NVQPVKCPVT VCGDIHGQFY DLIELFRIGG NAPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRLTI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRSL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAAQFNHNNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENME QNFLQFDPAP RQVEPDTTRK
301: TPDYFL
101: KVRYRDRLTI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRSL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAAQFNHNNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENME QNFLQFDPAP RQVEPDTTRK
301: TPDYFL
Arabidopsis Description
PP2A2Serine/threonine-protein phosphatase PP2A-2 catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q07098]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.