Factsheet for VIT_01s0026g01080.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_17s0000g06020.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10430.1	VIT_17s0000g06020.t01	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99209	Soybean	cytosol, nucleus	96.41	96.41
KRH45793	Soybean	cytosol, nucleus	96.41	96.41
Solyc01g011340.2.1	Tomato	cytosol, plastid	96.08	96.08
KRH69421	Soybean	cytosol, nucleus	96.08	96.08
PGSC0003DMT400013570	Potato	cytosol	96.08	96.08
KRH74722	Soybean	cytosol, nucleus	95.42	95.42
PGSC0003DMT400004853	Potato	cytosol	95.1	95.1
Solyc05g006590.2.1	Tomato	cytosol	94.77	94.77
PGSC0003DMT400058216	Potato	cytosol	94.77	94.77
VIT_17s0000g05330.t01	Wine grape	cytosol	94.44	94.44
AT1G10430.1	Thale cress	cytosol	94.44	94.44
AT1G59830.1	Thale cress	cytosol	93.46	93.46
CDY37977	Canola	cytosol	93.46	93.46
CDY34892	Canola	cytosol	93.46	93.46
CDY07799	Canola	cytosol	93.46	93.46
CDX93426	Canola	cytosol	93.46	93.46
Bra031712.1-P	Field mustard	cytosol	93.14	93.14
Bra019934.1-P	Field mustard	cytosol	93.14	93.14
Os06t0574500-01	Rice	cytosol, plasma membrane	92.48	92.48
GSMUA_Achr7P23950_001	Banana	cytosol	92.48	92.48
Bra016247.1-P	Field mustard	cytosol	92.48	92.48
CDY11632	Canola	cytosol	92.48	92.48
CDY30909	Canola	cytosol	92.48	92.48
CDY38778	Canola	cytosol	92.48	92.48
VIT_14s0066g02240.t01	Wine grape	cytosol	92.16	92.16
Bra027833.1-P	Field mustard	cytosol	92.16	92.16
CDY45151	Canola	cytosol	92.16	92.16
EER88560	Sorghum	cytosol	92.16	92.16
EES06511	Sorghum	cytosol	92.16	92.16
GSMUA_Achr1P11730_001	Banana	cytosol	92.16	92.16
Os02t0217600-02	Rice	cytosol, plasma membrane	92.16	91.86
AT1G69960.1	Thale cress	cytosol	92.16	91.86
TraesCS6A01G183700.1	Wheat	cytosol	91.83	91.83
TraesCS6B01G213200.1	Wheat	cytosol	91.83	91.83
TraesCS6D01G171400.1	Wheat	cytosol	91.83	91.83
Zm00001d046369_P002	Maize	cytosol	91.83	91.83
HORVU7Hr1G086410.1	Barley	cytosol	91.5	91.5
TraesCS7B01G263500.1	Wheat	cytosol	91.5	91.5
TraesCS7D01G358600.1	Wheat	cytosol	91.5	91.5
CDY52461	Canola	cytosol	91.5	91.5
TraesCS7A01G364400.1	Wheat	cytosol	90.85	91.15
Zm00001d016378_P002	Maize	cytosol	91.5	82.84
Zm00001d036949_P007	Maize	cytosol	81.7	81.17
VIT_06s0004g00830.t01	Wine grape	cytosol	80.07	78.03
HORVU6Hr1G038770.1	Barley	cytosol	91.5	73.49
GSMUA_Achr3P20430_001	Banana	plastid	84.31	73.09
VIT_19s0090g01290.t01	Wine grape	cytosol	66.01	66.23
VIT_13s0156g00060.t01	Wine grape	cytosol	80.07	61.56
GSMUA_AchrUn_...	Banana	cytosol	92.16	59.49
Zm00001d053589_P001	Maize	cytosol	61.11	59.37
VIT_10s0071g00950.t01	Wine grape	cytosol	56.21	56.77
VIT_06s0004g05530.t01	Wine grape	cytosol	44.12	44.85
VIT_08s0056g00220.t01	Wine grape	cytosol	43.14	44.44
VIT_13s0019g02410.t01	Wine grape	cytosol	45.42	44.41
VIT_14s0060g01750.t01	Wine grape	cytosol	44.44	41.85
VIT_05s0049g00890.t01	Wine grape	cytosol	44.44	41.72
VIT_02s0025g00480.t01	Wine grape	cytosol	43.46	41.69
VIT_14s0036g00370.t01	Wine grape	cytosol	45.1	38.02

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:100256981	wikigene:100256981	MapMan:13.4.1.2.3	MapMan:18.4.24.1.2.5
Gene3D:3.60.21.10	ProteinID:CBI32061	ProteinID:CBI32061.3	InterPro:Calcineurin-like_PHP_ApaH	UniProt:D7TNI8	EMBL:FN596002
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052	EntrezGene:LOC100256981
wikigene:LOC100256981	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668
PANTHER:PTHR11668:SF384	SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	TIGR:TC61876	UniParc:UPI0001BE3CBA
ArrayExpress:VIT_01s0026g01080	EnsemblPlantsGene:VIT_01s0026g01080	EnsemblPlants:VIT_01s0026g01080.t01	RefSeq:XP_002268216	RefSeq:XP_002268216.2	:

Description

Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:D7TNI8]

Coordinates

chr1:-:10067835..10075197

Molecular Weight (calculated)

35043.6 Da

IEP (calculated)

4.625

GRAVY (calculated)

-0.325

Length

306 amino acids

Sequence
(BLAST)

001: MPSHADLDRQ IEHLMECKPL SESEVKTLCD QARTILVEEY NVQPVKCPVT VCGDIHGQFY DLIELFRIGG NAPDTNYLFM GDYVDRGYYS VETVTLLVAL
101: KVRYRERITI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRGL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAAQFNHTNG LTLISRAHQL VMEGYNWCQE KNVVTVFSAP NYCYRCGNMA AILEIGENMD QNFLQFDPAP RQIEPDTTRK
301: TPDYFL

Best Arabidopsis Sequence Match ( AT1G10430.1 )
(BLAST)

001: MPSNGDLDRQ IEQLMECKPL SEADVRTLCD QARAILVEEY NVQPVKCPVT VCGDIHGQFY DLIELFRIGG NAPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRLTI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRSL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAAQFNHNNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENME QNFLQFDPAP RQVEPDTTRK
301: TPDYFL

Arabidopsis Description

PP2A2Serine/threonine-protein phosphatase PP2A-2 catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q07098]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.