Factsheet for Os06t0574500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 6
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0747400-01
Os06t0226700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10430.1	Os02t0747400-01	AT3G47620.1	21798944
AT1G10430.1	Os06t0226700-01	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0217600-02	Rice	cytosol, plasma membrane	96.73	96.42
Solyc01g011340.2.1	Tomato	cytosol, plastid	94.12	94.12
PGSC0003DMT400013570	Potato	cytosol	94.12	94.12
KRH69421	Soybean	cytosol, nucleus	94.12	94.12
KRH45793	Soybean	cytosol, nucleus	94.12	94.12
PGSC0003DMT400004853	Potato	cytosol	93.79	93.79
Solyc05g006590.2.1	Tomato	cytosol	93.46	93.46
KRH74722	Soybean	cytosol, nucleus	93.46	93.46
KRG99209	Soybean	cytosol, nucleus	93.46	93.46
GSMUA_Achr7P23950_001	Banana	cytosol	93.46	93.46
VIT_17s0000g05330.t01	Wine grape	cytosol	92.81	92.81
PGSC0003DMT400058216	Potato	cytosol	92.81	92.81
VIT_01s0026g01080.t01	Wine grape	cytosol	92.48	92.48
CDY34892	Canola	cytosol	92.16	92.16
CDY07799	Canola	cytosol	92.16	92.16
AT1G10430.1	Thale cress	cytosol	91.83	91.83
CDY52461	Canola	cytosol	91.83	91.83
Bra031712.1-P	Field mustard	cytosol	91.83	91.83
CDY37977	Canola	cytosol	91.5	91.5
CDX93426	Canola	cytosol	91.5	91.5
VIT_14s0066g02240.t01	Wine grape	cytosol	91.18	91.18
CDY30909	Canola	cytosol	91.18	91.18
Bra019934.1-P	Field mustard	cytosol	91.18	91.18
CDY38778	Canola	cytosol	90.85	90.85
AT1G59830.1	Thale cress	cytosol	90.85	90.85
Bra016247.1-P	Field mustard	cytosol	90.85	90.85
CDY11632	Canola	cytosol	90.85	90.85
Bra027833.1-P	Field mustard	cytosol	90.52	90.52
CDY45151	Canola	cytosol	90.52	90.52
AT1G69960.1	Thale cress	cytosol	90.52	90.23
Os03t0805300-01	Rice	plasma membrane	80.39	80.13
Os03t0167700-01	Rice	cytosol	78.1	76.11
Os10t0410600-02	Rice	cytosol, plasma membrane, plastid	78.1	76.11
GSMUA_Achr3P20430_001	Banana	plastid	84.31	73.09
Os09t0284200-01	Rice	cytosol, plasma membrane	66.34	66.12
GSMUA_AchrUn_...	Banana	cytosol	94.44	60.97
Os01t0691700-01	Rice	cytosol, plasma membrane	56.21	56.77
Os08t0455600-01	Rice	cytosol, plasma membrane	43.79	43.65
Os01t0349400-01	Rice	cytosol	45.42	42.77
Os06t0164100-02	Rice	cytosol, nucleus, plasma membrane	44.12	41.93
Os03t0268000-01	Rice	cytosol	43.79	41.61
Os02t0820000-01	Rice	cytosol	41.83	40.51

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:13.4.1.2.3	MapMan:18.4.24.1.2.5	Gene3D:3.60.21.10	EntrezGene:4341364
EMBL:AK071838	ProteinID:BAD61854.1	ProteinID:BAF19840.1	ProteinID:BAS98342.1	InterPro:Calcineurin-like_PHP_ApaH	ProteinID:EAZ37435.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	InterPro:IPR029052	InterPro:Metallo-depent_PP-like
EnsemblPlantsGene:Os06g0574500	EnsemblPlants:Os06t0574500-01	PFAM:PF00149	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668
PANTHER:PTHR11668:SF248	UniProt:Q0DBD3	SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000045069E
RefSeq:XP_015643067.1	:	:	:	:	:

Description

PROTEIN PHOSPHATASE 2A CATALYTIC SUBUNIT 1Protein phosphatase 2A. (Os06t0574500-01)

Coordinates

chr6:+:22307181..22313271

Molecular Weight (calculated)

35115.6 Da

IEP (calculated)

4.616

GRAVY (calculated)

-0.321

Length

306 amino acids

Sequence
(BLAST)

001: MPSHADLDRQ ISQLRECKFL GEAEVRALCE QAKAILMEEW NVQPVRCPVT VCGDIHGQFY DLIELFRIGG DSPDTNYLFM GDYVDRGYYS VETVTLLVAL
101: KVRYRDRITI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALVENQV FCLHGGLSPS LDTLDNIRAL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAQQFNHTNG LTLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENMD QNFLQFDPAP RQIEPDTTRK
301: TPDYFL

Best Arabidopsis Sequence Match ( AT1G10430.1 )
(BLAST)

001: MPSNGDLDRQ IEQLMECKPL SEADVRTLCD QARAILVEEY NVQPVKCPVT VCGDIHGQFY DLIELFRIGG NAPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRLTI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRSL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAAQFNHNNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENME QNFLQFDPAP RQVEPDTTRK
301: TPDYFL

Arabidopsis Description

PP2A2Serine/threonine-protein phosphatase PP2A-2 catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q07098]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.