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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 5
  • plastid 1
  • nucleus 1
  • mitochondrion 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G211500.1 Wheat cytosol 96.27 96.57
TraesCS4A01G093600.1 Wheat cytosol 96.27 96.57
HORVU4Hr1G060490.1 Barley cytosol 96.27 96.57
TraesCS4B01G210800.1 Wheat cytosol 95.96 96.26
EER95117 Sorghum cytosol 95.65 95.65
Zm00001d047835_P003 Maize cytosol, extracellular, plasma membrane 93.48 93.19
HORVU4Hr1G060530.1 Barley mitochondrion, peroxisome 89.44 92.6
CDY61002 Canola cytosol 87.89 88.99
VIT_06s0004g05530.t01 Wine grape cytosol 82.92 88.7
CDY24946 Canola cytosol 87.27 88.36
KRH73092 Soybean cytosol, nucleus 86.65 88.29
CDY20490 Canola cytosol 85.71 87.9
VIT_13s0019g02410.t01 Wine grape cytosol 85.4 87.86
Solyc06g030490.2.1 Tomato cytosol 82.92 87.83
PGSC0003DMT400017290 Potato cytosol 82.92 87.83
KRH15048 Soybean cytosol 85.71 87.62
AT2G39840.1 Thale cress cytosol 87.27 87.54
GSMUA_Achr8P19510_001 Banana cytosol 75.78 87.46
CDY10577 Canola cytosol 78.88 87.29
CDX88683 Canola cytosol 83.54 87.06
CDY71651 Canola cytosol 59.63 86.88
Bra005009.1-P Field mustard cytosol 77.95 86.55
AT5G59160.1 Thale cress cytosol 83.85 86.54
CDX71136 Canola cytosol 82.92 86.41
Bra002590.1-P Field mustard cytosol 83.23 86.17
Bra006731.1-P Field mustard cytosol 82.61 86.08
CDY32662 Canola cytosol 83.23 85.9
Bra020335.1-P Field mustard cytosol 83.23 85.9
Solyc06g076430.2.1 Tomato cytosol, nucleus 81.99 85.16
PGSC0003DMT400078199 Potato cytosol 81.68 84.84
CDY33013 Canola cytosol 80.43 84.64
CDX80301 Canola cytosol 80.12 84.31
CDY02866 Canola cytosol 83.54 83.28
Bra018397.1-P Field mustard cytosol 78.57 82.95
Bra018191.1-P Field mustard cytosol 79.81 82.9
AT2G29400.1 Thale cress cytosol 81.68 82.7
AT3G46820.1 Thale cress cytosol 80.12 82.69
Solyc06g005800.2.1 Tomato cytosol, nucleus 81.68 82.45
Os02t0820000-01 Rice cytosol 80.75 82.28
Bra000475.1-P Field mustard cytosol 80.43 81.45
CDX83308 Canola cytosol 80.43 81.45
CDY40180 Canola cytosol 79.81 81.07
CDX95749 Canola cytosol 80.12 80.62
CDY45437 Canola cytosol 79.81 80.56
CDX86100 Canola cytosol 76.4 80.39
PGSC0003DMT400053683 Potato cytosol 64.6 79.69
Os08t0455600-01 Rice cytosol, plasma membrane 75.16 78.83
Os06t0164100-02 Rice cytosol, nucleus, plasma membrane 77.64 77.64
Zm00001d028568_P004 Maize cytosol 95.96 75.37
Os01t0349400-01 Rice cytosol 69.88 69.23
Bra000153.1-P Field mustard cytosol 87.89 57.76
Os03t0805300-01 Rice plasma membrane 42.86 44.95
Os09t0284200-01 Rice cytosol, plasma membrane 42.55 44.63
Os02t0217600-02 Rice cytosol, plasma membrane 41.93 43.97
Os06t0574500-01 Rice cytosol, plasma membrane 41.61 43.79
Os03t0167700-01 Rice cytosol 42.24 43.31
Os10t0410600-02 Rice cytosol, plasma membrane, plastid 41.93 42.99
Os01t0691700-01 Rice cytosol, plasma membrane 37.58 39.93
CDX89311 Canola cytosol, plastid 26.09 12.17
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:18.4.24.1.1Gene3D:3.60.21.10ProteinID:AAP06889.1ProteinID:AAP06897.1
ProteinID:ABF95164.1ProteinID:ABF95165.1ProteinID:ABF95166.1EMBL:AK073140ProteinID:BAF11583.1ProteinID:BAS83435.1
InterPro:Calcineurin-like_PHP_ApaHGO:GO:0003674GO:GO:0003824GO:GO:0004721GO:GO:0004722GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006464GO:GO:0006468
GO:GO:0006470GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009628
GO:GO:0009987GO:GO:0010161GO:GO:0016787GO:GO:0019538GO:GO:0046872InterPro:IPR029052
InterPro:Metallo-depent_PP-likeEnsemblPlantsGene:Os03g0268000EnsemblPlants:Os03t0268000-01UniProt:P48489PFAM:PF00149PFAM:PF16891
PRINTS:PR00114ScanProsite:PS00125PANTHER:PTHR11668PANTHER:PTHR11668:SF403SMART:SM00156SUPFAM:SSF56300
InterPro:STPPase_NInterPro:Ser/Thr-sp_prot-phosphataseEMBL:U31773UniParc:UPI0000D7E696SEG:seg:
Description
Protein phosphatase 47Similar to Protein phosphatase 1, catalytic gsmms subunit. (Os03t0268000-01);Similar to Serine/threonine protein phosphatase. (Os03t0268000-02);Non-protein coding transcript. (Os03t0268000-03)
Coordinates
chr3:+:8884203..8889672
Molecular Weight (calculated)
36168.5 Da
IEP (calculated)
4.814
GRAVY (calculated)
-0.147
Length
322 amino acids
Sequence
(BLAST)
001: MAAAPGAGGQ GGGGMDAVLL DDIIRRLLEV RTARPGKQVQ LSESEIRQLC TVSREIFLSQ PNLLELEAPI KICGDIHGQY SDLLRLFEYG GFPPEANYLF
101: LGDYVDRGKQ SLETICLLLA YKIKYPENFF LLRGNHECAS INRIYGFYDE CKRRFNVRLW KVFTDCFNCL PVAALIDDKI LCMHGGLSPD LTHLDEIKSL
201: PRPTDVPDTG LLCDLLWSDP GKDVQGWGMN DRGVSYTFGA DKVSEFLEKH DLDLICRAHQ VVEDGYEFFA DRQLVTIFSA PNYCGEFDNA GAMMSVDETL
301: MCSFQILKPA ERKGKFMASN KM
Best Arabidopsis Sequence Match ( AT2G39840.1 )
(BLAST)
001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I
Arabidopsis Description
TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.