Factsheet for PGSC0003DMT400078199

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
vacuole 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g076430.2.1	Tomato	cytosol, nucleus	99.68	99.68
PGSC0003DMT400053683	Potato	cytosol	76.45	90.8
CDY71651	Canola	cytosol	62.58	87.78
CDX71136	Canola	cytosol	85.16	85.44
CDX88683	Canola	cytosol	85.16	85.44
AT5G59160.1	Thale cress	cytosol	85.81	85.26
Bra006731.1-P	Field mustard	cytosol	84.84	85.11
Bra020335.1-P	Field mustard	cytosol	85.48	84.94
CDY32662	Canola	cytosol	85.48	84.94
Bra002590.1-P	Field mustard	cytosol	85.16	84.89
VIT_06s0004g05530.t01	Wine grape	cytosol	81.94	84.39
CDY33013	Canola	cytosol	81.94	83.01
Bra018397.1-P	Field mustard	cytosol	81.61	82.95
PGSC0003DMT400017290	Potato	cytosol	81.29	82.89
CDX80301	Canola	cytosol	81.61	82.68
HORVU4Hr1G060490.1	Barley	cytosol	85.48	82.55
TraesCS4A01G093600.1	Wheat	cytosol	85.48	82.55
TraesCS4D01G211500.1	Wheat	cytosol	85.48	82.55
TraesCS4B01G210800.1	Wheat	cytosol	85.16	82.24
CDY02866	Canola	cytosol	85.48	82.04
HORVU4Hr1G060530.1	Barley	mitochondrion, peroxisome	82.26	81.99
Bra018191.1-P	Field mustard	cytosol	81.94	81.94
GSMUA_Achr8P19510_001	Banana	cytosol	73.55	81.72
Os03t0268000-01	Rice	cytosol	84.84	81.68
AT3G46820.1	Thale cress	cytosol	81.94	81.41
AT2G29400.1	Thale cress	cytosol	82.9	80.82
Zm00001d047835_P003	Maize	cytosol, extracellular, plasma membrane	84.19	80.81
Bra000475.1-P	Field mustard	cytosol	82.58	80.5
CDX83308	Canola	cytosol	82.58	80.5
CDY45437	Canola	cytosol	82.58	80.25
CDY40180	Canola	cytosol	81.94	80.13
EER95117	Sorghum	cytosol	83.23	80.12
CDX86100	Canola	cytosol	78.71	79.74
CDX95749	Canola	cytosol	82.26	79.69
PGSC0003DMT400044371	Potato	cytosol	81.61	76.67
PGSC0003DMT400041996	Potato	cytosol	82.58	74.42
PGSC0003DMT400063710	Potato	cytosol	71.61	70.48
Zm00001d028568_P004	Maize	cytosol	83.87	63.41
PGSC0003DMT400060162	Potato	cytosol	81.61	61.26
PGSC0003DMT400058216	Potato	cytosol	45.48	46.08
PGSC0003DMT400013570	Potato	cytosol	45.48	46.08
PGSC0003DMT400004853	Potato	cytosol	44.84	45.42
PGSC0003DMT400057148	Potato	cytosol	43.87	44.59
PGSC0003DMT400079934	Potato	cytosol	44.19	43.91
PGSC0003DMT400081973	Potato	cytosol	43.87	43.45
PGSC0003DMT400039336	Potato	cytosol	39.68	40.59
PGSC0003DMT400069607	Potato	cytosol	39.68	36.72
CDX89311	Canola	cytosol, plastid	26.77	12.03

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102602508	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872
InterPro:IPR029052	UniProt:M1CZL3	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PFAM:PF16891	EnsemblPlantsGene:PGSC0003DMG400030424
PGSC:PGSC0003DMG400030424	EnsemblPlants:PGSC0003DMT400078199	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF392
SMART:SM00156	SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000295EA4D	RefSeq:XP_006350791.1

Description

Serine/threonine-protein phosphatase PP1 isozyme 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400030424]

Coordinates

chr6:-:56829948..56835522

Molecular Weight (calculated)

35372.6 Da

IEP (calculated)

4.703

GRAVY (calculated)

-0.151

Length

310 amino acids

Sequence
(BLAST)

001: MAQNGQGIEP AVLDDIINRL LEFRNARTVR QVQLSEAEIR SLCTAARAIF LQQPNLLELE APIKICGDIH GQYGDLLRLF EYGGFPPQSN YLFLGDYVDR
101: GKQSLETICL LLAYKIKYPE NFFLLRGNHE CASINRIYGF YDECKRRFNV RLWKVFTDCF NCLPVAALID DKILCMHGGL SPDLTDMDLI RNLPRPTDVP
201: DSGLLCDLLW SDPSREVKGW GMNDRGVSYT FGPDKVAEFL MQQDMDLVCR AHQVVEDGYE FFAERQLVTV FSAPNYCGEF DNAGAMMSVD ENLMCSFQIL
301: KPADRKPRFL

Best Arabidopsis Sequence Match ( AT5G59160.3 )
(BLAST)

001: MAQQGQGSMD PAALDDIIRR LLDYRNPKPG TKQAMLNESE IRQLCIVSRE IFLQQPNLLE LEAPIKICGD IHGQYSDLLR LFEYGGFPPT ANYLFLGDYV
101: DRGKQSLETI CLLLAYKIKY PENFFLLRGN HECASINRIY GFYDECKRRF SVRLWKVFTD SFNCLPVAAV IDDKILCMHG GLSPDLTNVE QIKNIKRPTD
201: VPDSGLLCDL LWSDPSKDVK GWGMNDRGVS YTFGPDKVAE FLIKNDMDLI CRAHQVVEDG YEFFADRQLV TIFSAPNYCG EFDNAGAMMS VDESLMCSFQ
301: ILKPADRKPR FL

Arabidopsis Description

TOPP2Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178UGI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.