Factsheet for PGSC0003DMT400081973

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g005950.2.1	Tomato	cytosol, extracellular	99.36	99.36
TraesCS5A01G455000.1	Wheat	cytosol	85.3	94.35
VIT_06s0004g00830.t01	Wine grape	cytosol	94.57	94.27
KRH42814	Soybean	cytosol	93.29	93.89
KRH58904	Soybean	cytosol	93.29	93.89
Os03t0805300-01	Rice	plasma membrane	92.01	93.81
Zm00001d013047_P002	Maize	cytosol, plasma membrane	92.01	93.81
KXG37326	Sorghum	cytosol	92.01	93.81
Zm00001d034517_P001	Maize	cytosol, extracellular, mitochondrion	91.69	93.49
GSMUA_Achr4P28610_001	Banana	cytosol	93.29	92.99
GSMUA_Achr9P11070_001	Banana	cytosol	86.58	92.81
TraesCS5D01G465400.1	Wheat	golgi	90.73	92.51
GSMUA_Achr2P12450_001	Banana	cytosol	92.01	91.72
PGSC0003DMT400079934	Potato	cytosol	91.37	91.67
HORVU5Hr1G074200.4	Barley	cytosol	89.46	91.21
TraesCS5A01G270900.1	Wheat	cytosol	89.14	90.88
TraesCS5B01G271300.1	Wheat	cytosol	89.14	90.88
Zm00001d027826_P001	Maize	cytosol	89.78	89.78
TraesCS4D01G282100.1	Wheat	cytosol	89.78	89.78
TraesCS4B01G283300.2	Wheat	cytosol	89.78	89.78
Os03t0167700-01	Rice	cytosol	89.78	89.49
TraesCS5D01G278600.1	Wheat	cytosol	83.71	88.22
Os10t0410600-02	Rice	cytosol, plasma membrane, plastid	88.18	87.9
EER94259	Sorghum	cytosol	88.18	87.62
GSMUA_Achr4P22190_001	Banana	cytosol	69.01	84.71
GSMUA_Achr8P15360_001	Banana	cytosol	86.26	83.85
HORVU5Hr1G109430.2	Barley	cytosol, plastid	91.05	83.82
TraesCS5B01G464000.1	Wheat	endoplasmic reticulum, plasma membrane	86.58	83.38
Zm00001d048336_P003	Maize	cytosol	89.78	82.89
TraesCS4A01G020400.1	Wheat	cytosol	83.07	81.0
PGSC0003DMT400013570	Potato	cytosol	78.59	80.39
PGSC0003DMT400058216	Potato	cytosol	78.27	80.07
PGSC0003DMT400004853	Potato	cytosol	77.64	79.41
EER95434	Sorghum	plastid	90.1	73.25
Zm00001d032989_P003	Maize	cytosol	88.5	71.58
HORVU4Hr1G074680.4	Barley	cytosol, plastid	89.78	68.54
PGSC0003DMT400057148	Potato	cytosol	63.26	64.92
PGSC0003DMT400039336	Potato	cytosol	54.31	56.11
PGSC0003DMT400069607	Potato	cytosol	53.35	49.85
PGSC0003DMT400078199	Potato	cytosol	43.45	43.87
PGSC0003DMT400017290	Potato	cytosol	42.49	43.75
PGSC0003DMT400063710	Potato	cytosol	43.45	43.17
PGSC0003DMT400044371	Potato	cytosol	43.77	41.52
PGSC0003DMT400053683	Potato	cytosol	33.87	40.61
PGSC0003DMT400041996	Potato	cytosol	44.09	40.12
PGSC0003DMT400060162	Potato	cytosol	44.09	33.41

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102604088	MapMan:13.4.1.2.3	MapMan:18.4.24.1.2.5	Gene3D:3.60.21.10
InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052
UniProt:M1D5E2	InterPro:Metallo-depent_PP-like	PFAM:PF00149	EnsemblPlantsGene:PGSC0003DMG400032180	PGSC:PGSC0003DMG400032180	EnsemblPlants:PGSC0003DMT400081973
PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF388	SMART:SM00156	SUPFAM:SSF56300
InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000294F6EE	RefSeq:XP_006354151.1	:	:	:

Description

Serine/threonine-protein phosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400032180]

Coordinates

chr1:-:1477411..1484952

Molecular Weight (calculated)

35532.1 Da

IEP (calculated)

4.854

GRAVY (calculated)

-0.340

Length

313 amino acids

Sequence
(BLAST)

001: MSLDPVVSSS QGNLDEQIAQ LMQCKPLSEQ EVKGLCQKAK EILMDESNVQ PVKSPVTICG DIHGQFHDLA ELFRIGGKCP DTNYLFMGDY VDRGYYSVET
101: VTLLVALKVR YPQRITILRG NHESRQITQV YGFYDECLRK YGNANVWKTF TDLFDYFPLT ALVESEIFCL HGGLSPSVET LDNIRNFDRV QEVPHEGAMC
201: DLLWSDPDDR CGWGISPRGA GYTFGQDISE QFNHTNGLKL IARAHQLVME GFNWAHDQKV VTIFSAPNYC YRCGNMASIL EVDDCNGHTF IQFEPAPRRG
301: EPDVTRRTPD YFL

Best Arabidopsis Sequence Match ( AT3G58500.1 )
(BLAST)

001: MGANSLPTDA TLDLDEQISQ LMQCKPLSEQ QVRALCEKAK EILMDESNVQ PVKSPVTICG DIHGQFHDLA ELFRIGGKCP DTNYLFMGDY VDRGYYSVET
101: VTLLVGLKVR YPQRITILRG NHESRQITQV YGFYDECLRK YGNANVWKIF TDLFDYFPLT ALVESEIFCL HGGLSPSIET LDNIRNFDRV QEVPHEGPMC
201: DLLWSDPDDR CGWGISPRGA GYTFGQDISE QFNHTNNLKL IARAHQLVMD GFNWAHEQKV VTIFSAPNYC YRCGNMASIL EVDDCRNHTF IQFEPAPRRG
301: EPDVTRRTPD YFL

Arabidopsis Description

PP2A4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VCH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.