CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0410600-02	Rice	cytosol, plasma membrane, plastid	97.46	97.77
GSMUA_Achr9P11070_001	Banana	cytosol	86.03	92.81
KXG37326	Sorghum	cytosol	89.52	91.86
KRH42814	Soybean	cytosol	88.89	90.03
KRH58904	Soybean	cytosol	88.89	90.03
VIT_06s0004g00830.t01	Wine grape	cytosol	89.21	89.49
GSMUA_Achr4P28610_001	Banana	cytosol	88.89	89.17
AT3G58500.1	Thale cress	cytosol	88.57	89.14
AT2G42500.1	Thale cress	cytosol	88.57	89.14
PGSC0003DMT400079934	Potato	cytosol	88.25	89.1
Solyc01g073650.2.1	Tomato	cytosol	88.25	89.1
GSMUA_Achr2P12450_001	Banana	cytosol	88.57	88.85
CDY51518	Canola	cytosol	88.25	88.82
CDY55398	Canola	cytosol	88.25	88.82
Bra003340.1-P	Field mustard	cytosol	87.62	88.75
CDY00569	Canola	cytosol	87.94	88.5
CDX71949	Canola	cytosol	87.62	88.18
Bra007398.1-P	Field mustard	cytosol	87.62	88.18
Bra014569.1-P	Field mustard	cytosol	87.62	88.18
PGSC0003DMT400081973	Potato	cytosol	87.62	88.18
Solyc01g005950.2.1	Tomato	cytosol, extracellular	87.62	88.18
CDY69521	Canola	cytosol	87.62	88.18
CDX88988	Canola	cytosol	87.62	88.18
CDY06035	Canola	cytosol	87.62	88.18
Solyc01g034020.2.1	Tomato	cytosol	85.4	87.91
CDY66916	Canola	cytosol	87.3	87.86
CDX98300	Canola	cytosol	87.3	87.86
CDX67746	Canola	cytosol	56.51	87.68
CDY47976	Canola	cytosol	86.98	87.54
Bra016870.1-P	Field mustard	cytosol	86.98	87.54
CDY14840	Canola	cytosol	86.98	87.54
KRG96343	Soybean	cytosol	86.98	87.54
KRH68078	Soybean	cytosol	86.67	87.22
KRH71796	Soybean	cytosol	86.35	86.62
KRH38026	Soybean	cytosol	86.35	86.62
GSMUA_Achr4P22190_001	Banana	cytosol	66.98	82.75
GSMUA_Achr8P15360_001	Banana	cytosol	82.54	80.75
Zm00001d032989_P003	Maize	cytosol	98.41	80.1
Bra000262.1-P	Field mustard	cytosol	81.9	78.42
EES06511	Sorghum	cytosol	75.56	77.78
Bra004705.1-P	Field mustard	cytosol	83.17	77.74
EER95434	Sorghum	plastid	94.92	77.66
EER88560	Sorghum	cytosol	75.24	77.45
VIT_13s0156g00060.t01	Wine grape	cytosol	89.84	71.11
EER98649	Sorghum	cytosol	64.13	65.8
EES01303	Sorghum	cytosol	53.33	55.45
EES13960	Sorghum	cytosol	41.9	43.28
EER95117	Sorghum	cytosol	41.9	40.99
EES02921	Sorghum	cytosol	42.22	40.92
EER89259	Sorghum	cytosol	40.32	39.2
EER90463	Sorghum	cytosol	41.59	37.54
KXG31386	Sorghum	cytosol	41.59	35.69
OQU77459	Sorghum	cytosol	42.22	28.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:13.4.1.2.3	MapMan:18.4.24.1.2.5	Gene3D:3.60.21.10	EntrezGene:8062264
UniProt:C5WM64	InterPro:Calcineurin-like_PHP_ApaH	EnsemblPlants:EER94259	ProteinID:EER94259	ProteinID:EER94259.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF247	SMART:SM00156	EnsemblPlantsGene:SORBI_3001G251700
SUPFAM:SSF56300	unigene:Sbi.9220	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0001A83339	RefSeq:XP_002467261.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:27177700..27184695

Molecular Weight (calculated)

35658.3 Da

IEP (calculated)

4.893

GRAVY (calculated)

-0.328

Length

315 amino acids

Sequence
(BLAST)

001: MEGLAGSRGG GGCGGLDAQI EQLMECRPLA ETEVKTLCEK AKEILMEESN VQPVKSPVTI CGDIHGQFHD LVELFRIGGK CPDTNYLFMG DYVDRGYYSV
101: ETVTLLVALK VRYPQRITIL RGNHESRQIT QVYGFYDECL RKYGSANVWK IFTDLFDYFP LTALVESEIF CLHGGLSPSI ENLDSVRSLD RVQEVPHEGP
201: MCDLLWSDPD DRCGWGISPR GAGYTFGQDI SEQFNHTNNL KLVARAHQLV MEGYNWAHEQ KVVTIFSAPN YCYRCGNMAS ILEVDDCRNH TFIQFEPAPR
301: RGEPDVTRRT PDYFL

Best Arabidopsis Sequence Match ( AT3G58500.1 )
(BLAST)

001: MGANSLPTDA TLDLDEQISQ LMQCKPLSEQ QVRALCEKAK EILMDESNVQ PVKSPVTICG DIHGQFHDLA ELFRIGGKCP DTNYLFMGDY VDRGYYSVET
101: VTLLVGLKVR YPQRITILRG NHESRQITQV YGFYDECLRK YGNANVWKIF TDLFDYFPLT ALVESEIFCL HGGLSPSIET LDNIRNFDRV QEVPHEGPMC
201: DLLWSDPDDR CGWGISPRGA GYTFGQDISE QFNHTNNLKL IARAHQLVMD GFNWAHEQKV VTIFSAPNYC YRCGNMASIL EVDDCRNHTF IQFEPAPRRG
301: EPDVTRRTPD YFL

Arabidopsis Description

PP2A4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VCH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.