CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051898_P001	Maize	cytosol	67.57	98.02
TraesCS6D01G381300.1	Wheat	cytosol	80.93	93.99
Os02t0820000-01	Rice	cytosol	80.11	93.04
TraesCS6B01G436400.1	Wheat	cytosol	80.93	92.81
TraesCS6A01G396400.1	Wheat	cytosol	80.93	92.81
Zm00001d018503_P002	Maize	cytosol	65.94	90.98
HORVU6Hr1G091550.13	Barley	cytosol	83.65	85.04
GSMUA_Achr2P04120_001	Banana	cytosol	65.67	79.28
EER95117	Sorghum	cytosol	68.39	77.95
EES13960	Sorghum	cytosol	62.4	75.08
EER89259	Sorghum	cytosol	64.31	72.84
EES02921	Sorghum	cytosol	59.67	67.38
Zm00001d053539_P001	Maize	cytosol	46.59	60.64
EER90463	Sorghum	cytosol	57.49	60.46
Zm00001d046377_P001	Maize	mitochondrion	40.05	47.57
OQU77459	Sorghum	cytosol	58.86	45.47
EER98649	Sorghum	cytosol	37.33	44.63
KXG37326	Sorghum	cytosol	36.78	43.97
EER88560	Sorghum	cytosol	35.97	43.14
EES06511	Sorghum	cytosol	35.69	42.81
EER94259	Sorghum	cytosol	35.69	41.59
EES01303	Sorghum	cytosol	32.15	38.94
EER95434	Sorghum	plastid	36.24	34.55

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.1	Gene3D:3.60.21.10	UniProt:A0A194YT76	InterPro:Calcineurin-like_PHP_ApaH
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872
InterPro:IPR029052	EnsemblPlants:KXG31386	ProteinID:KXG31386	ProteinID:KXG31386.1	InterPro:Metallo-depent_PP-like	PFAM:PF00149
PFAM:PF16891	PIRSF:PIRSF033096	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF405
SMART:SM00156	EnsemblPlantsGene:SORBI_3004G348300	SUPFAM:SSF56300	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI0001C80CA1

Description

hypothetical protein

Coordinates

chr4:-:67749298..67752218

Molecular Weight (calculated)

41683.5 Da

IEP (calculated)

5.254

GRAVY (calculated)

-0.047

Length

367 amino acids

Sequence
(BLAST)

001: MDPALLDDVI RRLLEVKNLK PGKNAQLSES EIKQLCAAAK EIFLSQPNLL ELEAPIKICG DVHGQYSDLL RLFDYGGYPP HANYLFLGDY VDRGKQSLET
101: ICLLLAYKVK YPENFFLLRG NHECASVNRI YGFYDECKRR FSVKLWKTFT DCFNCLPVSA LIDEKILCMH GGLSPELNKL EQILNLNRPT DVPDTGLLCD
201: LLWSDPSNEA TGWAMNDRGV SFTFGPDKVN EFLEKHDLDL ICRAHQVVED GYEFFANRQL VTIFSAPNYC GEFDNAGAMM SVDETLMCSF QILKPARKML
301: GGSTNNKSGF KVCMFNMEAV YICQISTICC PTIFLVPLDI SVLNFSRHYN MIVWHPSVTV CFKMMNE

Best Arabidopsis Sequence Match ( AT2G39840.1 )
(BLAST)

001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I

Arabidopsis Description

TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.