Factsheet for TraesCS6A01G396400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G381300.1	Wheat	cytosol	98.75	100.0
TraesCS6B01G436400.1	Wheat	cytosol	100.0	100.0
Os02t0820000-01	Rice	cytosol	92.19	93.35
Zm00001d051898_P001	Maize	cytosol	73.75	93.28
Zm00001d018503_P002	Maize	cytosol	73.75	88.72
HORVU6Hr1G091550.13	Barley	cytosol	97.19	86.15
KXG31386	Sorghum	cytosol	92.81	80.93
TraesCS4A01G093600.1	Wheat	cytosol	80.62	80.37
GSMUA_Achr2P04120_001	Banana	cytosol	75.94	79.93
TraesCS6A01G404700.1	Wheat	cytosol	72.5	76.32
TraesCS7A01G126500.1	Wheat	cytosol	74.06	73.83
TraesCS4A01G315000.1	Wheat	cytosol	68.75	67.48
TraesCS1A01G095500.1	Wheat	cytosol	66.88	65.85
TraesCS3A01G195500.1	Wheat	cytosol	68.12	63.01
Zm00001d053539_P001	Maize	cytosol	52.5	59.57
TraesCS3A01G081200.1	Wheat	cytosol	33.12	54.08
Zm00001d046377_P001	Maize	mitochondrion	44.69	46.28
TraesCS5A01G455000.1	Wheat	cytosol	39.06	44.17
TraesCS5A01G270900.1	Wheat	cytosol	41.88	43.65
TraesCS6A01G183700.1	Wheat	cytosol	41.56	43.46
TraesCS5A01G176800.1	Wheat	cytosol	41.56	43.32
TraesCS7A01G364400.1	Wheat	cytosol	40.62	42.62
TraesCS3A01G261200.1	Wheat	cytosol	38.12	40.26
TraesCS4A01G020400.1	Wheat	cytosol	40.31	40.19
TraesCS1A01G373300.1	Wheat	cytosol	37.19	33.24

Protein Annotations

EnsemblPlants:TraesCS6A01G396400.1	EnsemblPlantsGene:TraesCS6A01G396400	Gene3D:3.60.21.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016787
InterPro:Calcineurin-like_PHP_ApaH	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	InterPro:STPPase_N	InterPro:Ser/Thr-sp_prot-phosphatase	KEGG:04658+3.1.3.16
KEGG:04660+3.1.3.16	PANTHER:PTHR11668	PANTHER:PTHR11668:SF405	PFAM:PF00149	PFAM:PF16891	PRINTS:PR00114
ScanProsite:PS00125	SMART:SM00156	SUPFAM:SSF56300	TIGR:cd07414	MapMan:18.4.24.1.1	:

Description

No Description!

Coordinates

chr6A:-:608630670..608634387

Molecular Weight (calculated)

36179.5 Da

IEP (calculated)

4.983

GRAVY (calculated)

-0.220

Length

320 amino acids

Sequence
(BLAST)

001: MEKGMDPALL DNIIARLLEV KSLKPGKNAQ LSESEIKQLC AASKEIFLAQ PNLLELEAPI KICGDVHGQY SDLLRLFEYG GYPPQSNYLF LGDYVDRGKQ
101: SLETICLLLA YKVKYPENFF LLRGNHECAS VNRIYGFYDE CKRRFSVKLW KTFTDCFNCL PVSALIDEKI LCMHGGLSPE LNKLDQILNL NRPTDVPDTG
201: LLCDLLWSDP SNEAQGWAMN DRGVSYTFGP DKVAEFLEKH DLDLICRAHQ VVEDGYEFFA DRQLVTIFSA PNYCGEFDNA GAMMSVDETL MCSFQILKPA
301: RKMLPGSTNN KSGFKSMRGW

Best Arabidopsis Sequence Match ( AT2G29400.1 )
(BLAST)

001: MAEKPAQEQE QKRAMEPAVL DDIIRRLVEF RNTRPGSGKQ VHLSEGEIRQ LCAVSKEIFL QQPNLLELEA PIKICGDIHG QYSDLLRLFE YGGFPPEANY
101: LFLGDYVDRG KQSLETICLL LAYKIKYPEN FFLLRGNHES ASINRIYGFY DECKRRFNVR LWKIFTDCFN CLPVAALIDD RILCMHGGIS PELKSLDQIR
201: NIARPMDIPE SGLVCDLLWS DPSGDVGWGM NDRGVSYTFG ADKVAEFLEK HDMDLICRAH QVVEDGYEFF AERQLVTVFS APNYCGEFDN AGAMMSIDES
301: LMCSFQILKP SEKKSPFL

Arabidopsis Description

TOPP1Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VXL8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.