Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G380200.1 | Wheat | cytosol | 84.08 | 99.34 |
| TraesCS3A01G261200.1 | Wheat | cytosol | 80.17 | 94.72 |
| TraesCS1B01G393500.1 | Wheat | cytosol | 79.05 | 92.79 |
| HORVU1Hr1G083000.1 | Barley | cytosol | 91.62 | 91.88 |
| Solyc06g072140.2.1 | Tomato | cytosol | 77.09 | 91.09 |
| KRG90576 | Soybean | cytosol, nucleus | 76.82 | 90.76 |
| KRH36174 | Soybean | cytosol, nucleus | 76.54 | 90.43 |
| PGSC0003DMT400039336 | Potato | cytosol | 76.26 | 90.1 |
| VIT_10s0071g00950.t01 | Wine grape | cytosol | 76.26 | 90.1 |
| KRH36176 | Soybean | cytosol | 76.26 | 90.1 |
| GSMUA_AchrUn_... | Banana | cytosol | 76.26 | 90.1 |
| GSMUA_Achr9P21520_001 | Banana | cytosol | 75.98 | 90.07 |
| AT3G19980.1 | Thale cress | cytosol | 75.98 | 89.77 |
| CDY33438 | Canola | cytosol | 75.98 | 89.77 |
| Solyc03g019900.2.1 | Tomato | cytosol | 75.98 | 89.77 |
| CDY70204 | Canola | cytosol | 75.7 | 89.44 |
| Bra038247.1-P | Field mustard | cytosol | 75.7 | 89.44 |
| AT1G50370.1 | Thale cress | cytosol | 75.7 | 89.44 |
| CDY25366 | Canola | cytosol | 75.42 | 89.11 |
| Bra001770.1-P | Field mustard | cytosol | 74.86 | 88.45 |
| CDY24572 | Canola | cytosol | 74.86 | 88.45 |
| CDX82268 | Canola | cytosol | 74.86 | 88.45 |
| Bra027930.1-P | Field mustard | cytosol | 46.09 | 88.24 |
| CDY69052 | Canola | cytosol | 76.54 | 87.26 |
| CDY03595 | Canola | cytosol | 76.54 | 82.78 |
| PGSC0003DMT400069607 | Potato | cytosol | 76.82 | 82.09 |
| KRH40922 | Soybean | cytosol | 70.39 | 82.08 |
| Bra035830.1-P | Field mustard | cytosol | 75.42 | 80.12 |
| Bra014246.1-P | Field mustard | cytosol | 76.26 | 78.67 |
| TraesCS5A01G176800.1 | Wheat | cytosol | 50.28 | 58.63 |
| TraesCS5A01G455000.1 | Wheat | cytosol | 46.09 | 58.3 |
| TraesCS6A01G183700.1 | Wheat | cytosol | 48.32 | 56.54 |
| TraesCS5A01G270900.1 | Wheat | cytosol | 47.49 | 55.37 |
| TraesCS7A01G364400.1 | Wheat | cytosol | 46.93 | 55.08 |
| TraesCS4A01G020400.1 | Wheat | cytosol | 46.65 | 52.02 |
| CDY36067 | Canola | plasma membrane | 79.61 | 38.83 |
| TraesCS1A01G095500.1 | Wheat | cytosol | 34.92 | 38.46 |
| TraesCS6A01G404700.1 | Wheat | cytosol | 32.4 | 38.16 |
| TraesCS6A01G396400.1 | Wheat | cytosol | 33.24 | 37.19 |
| TraesCS4A01G093600.1 | Wheat | cytosol | 33.24 | 37.07 |
| TraesCS3A01G081200.1 | Wheat | cytosol | 20.11 | 36.73 |
| TraesCS7A01G126500.1 | Wheat | cytosol | 32.4 | 36.14 |
| TraesCS4A01G315000.1 | Wheat | cytosol | 32.4 | 35.58 |
| TraesCS3A01G195500.1 | Wheat | cytosol | 33.52 | 34.68 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G373300.1 | EnsemblPlantsGene:TraesCS1A01G373300 | Gene3D:3.60.21.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 |
| InterPro:Calcineurin-like_PHP_ApaH | InterPro:IPR029052 | InterPro:Metallo-depent_PP-like | InterPro:Ser/Thr-sp_prot-phosphatase | KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 |
| PANTHER:PTHR11668 | PANTHER:PTHR11668:SF24 | PFAM:PF00149 | PRINTS:PR00114 | ScanProsite:PS00125 | SMART:SM00156 |
| SUPFAM:SSF56300 | TIGR:cd07415 | MapMan:18.4.24.1.5 | : | : | : |
Description
No Description!
Coordinates
chr1A:-:549424218..549427545
Molecular Weight (calculated)
40695.5 Da
IEP (calculated)
4.929
GRAVY (calculated)
-0.222
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLVLEPIPF PSLAASFDWI ENKIVAPTKI QSPIRRNPSG EEREAVAGGF QRSGEMDLDL WIVKVKEGQH LAEHELQSLC EYVKEILIEE SNVQPVNSPV
101: TVCGDIHSQF HDLMKLFATG GHVPDTNYIF MGDFVDRGFN SLEVFTILLL LKARYPGHIT LLRGNHESRQ LTQVYGFYDE CQRKYGNANA WRYCTDVFDY
201: LTLSAIINGT VLCVHGGLSP DIRTVDQMRT IDRNCEIPHE GPFCDLMWSD PEEIETWGVS PRGAGWLFGS RVTTEFNHVN NLELVCRAHQ LVQEGLKYMF
301: PDKGLVTVWS APNYCYRCGN VASILSFSET MERDVKIFTE TDENNQMRGP RSAVPYFL
101: TVCGDIHSQF HDLMKLFATG GHVPDTNYIF MGDFVDRGFN SLEVFTILLL LKARYPGHIT LLRGNHESRQ LTQVYGFYDE CQRKYGNANA WRYCTDVFDY
201: LTLSAIINGT VLCVHGGLSP DIRTVDQMRT IDRNCEIPHE GPFCDLMWSD PEEIETWGVS PRGAGWLFGS RVTTEFNHVN NLELVCRAHQ LVQEGLKYMF
301: PDKGLVTVWS APNYCYRCGN VASILSFSET MERDVKIFTE TDENNQMRGP RSAVPYFL
001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL
Arabidopsis Description
FYPP3Phytochrome-associated serine/threonine-protein phosphatase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHE7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.