Factsheet for PGSC0003DMT400039336

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400012249
PGSC0003DMT400018574
PGSC0003DMT400072260

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50370.1	PGSC0003DMT400018574	AT3G56850.1	23404889
AT1G50370.1	PGSC0003DMT400072260	AT3G56850.1	23404889
AT1G50370.1	PGSC0003DMT400012249	AT4G25200.1	21798944
AT3G19980.1	PGSC0003DMT400018574	AT3G56850.1	23404889
AT3G19980.1	PGSC0003DMT400072260	AT3G56850.1	23404889

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g019900.2.1	Tomato	cytosol	99.67	99.67
KRG90576	Soybean	cytosol, nucleus	97.69	97.69
VIT_10s0071g00950.t01	Wine grape	cytosol	97.69	97.69
KRH36174	Soybean	cytosol, nucleus	97.36	97.36
AT3G19980.1	Thale cress	cytosol	97.03	97.03
KRH36176	Soybean	cytosol	97.03	97.03
GSMUA_AchrUn_...	Banana	cytosol	96.04	96.04
AT1G50370.1	Thale cress	cytosol	96.04	96.04
GSMUA_Achr9P21520_001	Banana	cytosol	95.71	96.03
CDY25366	Canola	cytosol	95.38	95.38
CDY33438	Canola	cytosol	95.38	95.38
Bra038247.1-P	Field mustard	cytosol	95.38	95.38
CDY70204	Canola	cytosol	95.38	95.38
CDX82268	Canola	cytosol	94.72	94.72
CDY24572	Canola	cytosol	94.72	94.72
Bra001770.1-P	Field mustard	cytosol	94.72	94.72
Bra027930.1-P	Field mustard	cytosol	58.42	94.65
Os01t0691700-01	Rice	cytosol, plasma membrane	93.73	93.73
HORVU3Hr1G064290.2	Barley	cytosol	93.07	93.07
TraesCS3D01G261300.1	Wheat	cytosol	93.07	93.07
TraesCS3B01G294200.1	Wheat	cytosol, golgi, plastid	93.07	93.07
TraesCS3A01G261200.1	Wheat	cytosol	93.07	93.07
Zm00001d011634_P003	Maize	cytosol	91.75	91.75
EES01303	Sorghum	cytosol	91.75	91.75
CDY69052	Canola	cytosol	95.05	91.72
TraesCS1D01G380200.1	Wheat	cytosol	90.76	90.76
PGSC0003DMT400069607	Potato	cytosol	97.69	88.36
KRH40922	Soybean	cytosol	89.44	88.27
CDY03595	Canola	cytosol	95.05	87.01
TraesCS1B01G393500.1	Wheat	cytosol	86.8	86.23
Bra035830.1-P	Field mustard	cytosol	94.72	85.16
Bra014246.1-P	Field mustard	cytosol	94.72	82.71
HORVU1Hr1G083000.1	Barley	cytosol	91.09	77.31
TraesCS1A01G373300.1	Wheat	cytosol	90.1	76.26
PGSC0003DMT400057148	Potato	cytosol	59.74	59.34
PGSC0003DMT400004853	Potato	cytosol	57.76	57.19
PGSC0003DMT400058216	Potato	cytosol	57.43	56.86
PGSC0003DMT400013570	Potato	cytosol	57.43	56.86
PGSC0003DMT400081973	Potato	cytosol	56.11	54.31
PGSC0003DMT400079934	Potato	cytosol	55.45	53.85
PGSC0003DMT400017290	Potato	cytosol	40.92	40.79
PGSC0003DMT400063710	Potato	cytosol	41.58	40.0
PGSC0003DMT400078199	Potato	cytosol	40.59	39.68
CDY36067	Canola	plasma membrane	94.72	39.1
PGSC0003DMT400053683	Potato	cytosol	31.35	36.4
PGSC0003DMT400044371	Potato	cytosol	39.6	36.36
PGSC0003DMT400041996	Potato	cytosol	41.25	36.34
PGSC0003DMT400060162	Potato	cytosol	40.92	30.02

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102605875	MapMan:18.4.24.1.5	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052	UniProt:M1B856
InterPro:Metallo-depent_PP-like	PFAM:PF00149	EnsemblPlantsGene:PGSC0003DMG400015212	PGSC:PGSC0003DMG400015212	EnsemblPlants:PGSC0003DMT400039336	PRINTS:PR00114
ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF24	SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase
UniParc:UPI0002951255	RefSeq:XP_006351535.1	:	:	:	:

Description

Serine/threonine-protein phosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400015212]

Coordinates

chr3:-:50205587..50213172

Molecular Weight (calculated)

34790.3 Da

IEP (calculated)

4.638

GRAVY (calculated)

-0.270

Length

303 amino acids

Sequence
(BLAST)

001: MDLDQWITTV KEGQHLAEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRVIDRNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTSE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNENMEREV KFFSETEENN QMRGPRTGVP
301: YFL

Best Arabidopsis Sequence Match ( AT3G19980.1 )
(BLAST)

001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL

Arabidopsis Description

FYPP3Phytochrome-associated serine/threonine-protein phosphatase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.