Factsheet for Solyc03g019900.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc08g078700.2.1
Solyc10g076920.1.1
Solyc10g081350.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50370.1	Solyc10g076920.1.1	AT3G56850.1	23404889
AT1G50370.1	Solyc10g081350.1.1	AT3G56850.1	23404889
AT1G50370.1	Solyc08g078700.2.1	AT4G25200.1	21798944
AT3G19980.1	Solyc10g076920.1.1	AT3G56850.1	23404889
AT3G19980.1	Solyc10g081350.1.1	AT3G56850.1	23404889

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400039336	Potato	cytosol	99.67	99.67
Solyc06g072140.2.1	Tomato	cytosol	97.69	97.69
KRG90576	Soybean	cytosol, nucleus	97.36	97.36
VIT_10s0071g00950.t01	Wine grape	cytosol	97.36	97.36
KRH36174	Soybean	cytosol, nucleus	97.03	97.03
AT3G19980.1	Thale cress	cytosol	96.7	96.7
KRH36176	Soybean	cytosol	96.7	96.7
AT1G50370.1	Thale cress	cytosol	95.71	95.71
GSMUA_AchrUn_...	Banana	cytosol	95.71	95.71
GSMUA_Achr9P21520_001	Banana	cytosol	95.38	95.7
Bra038247.1-P	Field mustard	cytosol	95.05	95.05
CDY25366	Canola	cytosol	95.05	95.05
CDY33438	Canola	cytosol	95.05	95.05
CDY70204	Canola	cytosol	95.05	95.05
CDX82268	Canola	cytosol	94.72	94.72
Bra001770.1-P	Field mustard	cytosol	94.72	94.72
Bra027930.1-P	Field mustard	cytosol	58.42	94.65
CDY24572	Canola	cytosol	94.39	94.39
Os01t0691700-01	Rice	cytosol, plasma membrane	93.4	93.4
HORVU3Hr1G064290.2	Barley	cytosol	92.74	92.74
TraesCS3D01G261300.1	Wheat	cytosol	92.74	92.74
TraesCS3B01G294200.1	Wheat	cytosol, golgi, plastid	92.74	92.74
TraesCS3A01G261200.1	Wheat	cytosol	92.74	92.74
EES01303	Sorghum	cytosol	91.42	91.42
Zm00001d011634_P003	Maize	cytosol	91.42	91.42
CDY69052	Canola	cytosol	94.72	91.4
TraesCS1D01G380200.1	Wheat	cytosol	90.43	90.43
KRH40922	Soybean	cytosol	89.11	87.95
CDY03595	Canola	cytosol	94.72	86.71
TraesCS1B01G393500.1	Wheat	cytosol	86.47	85.9
Bra035830.1-P	Field mustard	cytosol	94.39	84.87
Bra014246.1-P	Field mustard	cytosol	94.39	82.42
HORVU1Hr1G083000.1	Barley	cytosol	90.76	77.03
TraesCS1A01G373300.1	Wheat	cytosol	89.77	75.98
Solyc07g065020.2.1	Tomato	cytosol	59.74	59.34
Solyc05g006590.2.1	Tomato	cytosol	57.43	56.86
Solyc01g011340.2.1	Tomato	cytosol, plastid	57.43	56.86
Solyc01g034020.2.1	Tomato	cytosol	55.78	55.23
Solyc01g073650.2.1	Tomato	cytosol	55.45	53.85
Solyc01g005950.2.1	Tomato	cytosol, extracellular	55.45	53.67
Solyc06g030490.2.1	Tomato	cytosol	40.92	40.79
Solyc01g099860.2.1	Tomato	cytosol, unclear	41.25	39.68
Solyc06g076430.2.1	Tomato	cytosol, nucleus	40.26	39.35
CDY36067	Canola	plasma membrane	94.72	39.1
Solyc06g053630.2.1	Tomato	cytosol	40.59	38.2
Solyc06g005800.2.1	Tomato	cytosol, nucleus	39.93	37.93
Solyc05g055060.2.1	Tomato	cytosol, nucleus	40.59	37.85
Solyc09g090060.2.1	Tomato	cytosol	39.6	36.36

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.5	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052	UniProt:K4BEW2	InterPro:Metallo-depent_PP-like
PFAM:PF00149	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF24	SMART:SM00156
SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	EnsemblPlantsGene:Solyc03g019900.2	EnsemblPlants:Solyc03g019900.2.1	UniParc:UPI00027688E0	:

Description

Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:K4BEW2]

Coordinates

chr3:-:61293375..61300731

Molecular Weight (calculated)

34817.3 Da

IEP (calculated)

4.638

GRAVY (calculated)

-0.279

Length

303 amino acids

Sequence
(BLAST)

001: MDLDQWITTV KEGQHLAEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRVIDRNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTSE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL NFNENMEREV KFFSETEENN QMRGPRTGVP
301: YFL

Best Arabidopsis Sequence Match ( AT3G19980.1 )
(BLAST)

001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL

Arabidopsis Description

FYPP3Phytochrome-associated serine/threonine-protein phosphatase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.