Factsheet for GSMUA_AchrUn_randomP00350_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50370.1	GSMUA_Achr10P...	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_10s0071g00950.t01	Wine grape	cytosol	97.36	97.36
KRG90576	Soybean	cytosol, nucleus	97.36	97.36
KRH36174	Soybean	cytosol, nucleus	97.03	97.03
Solyc06g072140.2.1	Tomato	cytosol	97.03	97.03
KRH36176	Soybean	cytosol	96.7	96.7
AT1G50370.1	Thale cress	cytosol	96.04	96.04
PGSC0003DMT400039336	Potato	cytosol	96.04	96.04
GSMUA_Achr9P21520_001	Banana	cytosol	95.71	96.03
AT3G19980.1	Thale cress	cytosol	95.71	95.71
Solyc03g019900.2.1	Tomato	cytosol	95.71	95.71
Os01t0691700-01	Rice	cytosol, plasma membrane	95.05	95.05
CDY25366	Canola	cytosol	94.06	94.06
TraesCS3A01G261200.1	Wheat	cytosol	94.06	94.06
TraesCS3B01G294200.1	Wheat	cytosol, golgi, plastid	94.06	94.06
TraesCS3D01G261300.1	Wheat	cytosol	94.06	94.06
HORVU3Hr1G064290.2	Barley	cytosol	94.06	94.06
CDY33438	Canola	cytosol	93.73	93.73
CDY70204	Canola	cytosol	93.73	93.73
Bra038247.1-P	Field mustard	cytosol	93.73	93.73
CDY24572	Canola	cytosol	93.4	93.4
Zm00001d011634_P003	Maize	cytosol	93.07	93.07
Bra001770.1-P	Field mustard	cytosol	93.07	93.07
CDX82268	Canola	cytosol	93.07	93.07
EES01303	Sorghum	cytosol	93.07	93.07
Bra027930.1-P	Field mustard	cytosol	56.77	91.98
CDY69052	Canola	cytosol	94.39	91.08
TraesCS1D01G380200.1	Wheat	cytosol	90.76	90.76
KRH40922	Soybean	cytosol	89.11	87.95
PGSC0003DMT400069607	Potato	cytosol	96.7	87.46
CDY03595	Canola	cytosol	94.39	86.4
TraesCS1B01G393500.1	Wheat	cytosol	86.47	85.9
Bra035830.1-P	Field mustard	cytosol	93.4	83.98
Bra014246.1-P	Field mustard	cytosol	94.72	82.71
HORVU1Hr1G083000.1	Barley	cytosol	91.09	77.31
TraesCS1A01G373300.1	Wheat	cytosol	90.1	76.26
GSMUA_Achr7P06210_001	Banana	cytosol	59.41	59.21
GSMUA_Achr1P09340_001	Banana	cytosol	58.42	58.03
GSMUA_Achr9P11070_001	Banana	cytosol	54.79	56.85
GSMUA_Achr7P23950_001	Banana	cytosol	56.44	55.88
GSMUA_Achr1P11730_001	Banana	cytosol	56.11	55.56
GSMUA_Achr2P12450_001	Banana	cytosol	55.78	53.82
GSMUA_Achr4P28610_001	Banana	cytosol	55.78	53.82
GSMUA_Achr8P15360_001	Banana	cytosol	54.79	51.55
GSMUA_Achr4P22190_001	Banana	cytosol	40.26	47.84
GSMUA_Achr3P20430_001	Banana	plastid	48.84	41.93
GSMUA_Achr2P04120_001	Banana	cytosol	41.58	41.45
GSMUA_Achr11P...	Banana	cytosol	42.24	40.51
GSMUA_Achr4P09690_001	Banana	cytosol	40.59	39.94
GSMUA_Achr8P24570_001	Banana	cytosol	40.26	39.87
GSMUA_Achr2P02240_001	Banana	cytosol	41.58	39.25
GSMUA_Achr4P25210_001	Banana	cytosol	41.25	39.19
GSMUA_Achr8P19510_001	Banana	cytosol	35.97	39.07
GSMUA_Achr7P10840_001	Banana	cytosol	40.92	38.75
GSMUA_Achr10P...	Banana	cytosol	40.92	38.75
GSMUA_Achr4P29300_001	Banana	cytosol	40.59	38.68
GSMUA_Achr2P15380_001	Banana	cytosol	40.59	38.56
CDY36067	Canola	plasma membrane	93.07	38.42
GSMUA_Achr11P...	Banana	cytosol	41.25	38.34
GSMUA_Achr1P01390_001	Banana	cytosol	40.92	37.69
GSMUA_Achr11P...	Banana	cytosol	42.24	36.26
GSMUA_Achr8P06590_001	Banana	cytosol	33.0	35.71
GSMUA_AchrUn_...	Banana	cytosol	55.78	35.65
GSMUA_Achr4P31160_001	Banana	cytosol	40.26	28.18

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.5	Gene3D:3.60.21.10	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_AchrUn_randomG00350_001	EnsemblPlants:GSMUA_AchrUn_randomP00350_001	EnsemblPlants:GSMUA_AchrUn_randomT00350_001
InterPro:IPR029052	UniProt:M0U547	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PRINTS:PR00114	ScanProsite:PS00125
PANTHER:PTHR11668	PANTHER:PTHR11668:SF24	SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000296E598

Description

Phytochrome-associated serine/threonine protein phosphatase [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG00350_001]

Coordinates

chrchrUn_random:-:1161469..1171969

Molecular Weight (calculated)

34874.4 Da

IEP (calculated)

4.648

GRAVY (calculated)

-0.278

Length

303 amino acids

Sequence
(BLAST)

001: MDLDLWISKV KEGQHLQEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPE TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRVIDRNS EIPHEGPFCD LMWSDPEEIE
201: TWAVSPRGAG WLFGSRVTAE FNRINNLDLI CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNENMEREV KFFTETEENN QMRGPRTGVP
301: YFL

Best Arabidopsis Sequence Match ( AT1G50370.1 )
(BLAST)

001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPE TNYIFMGDFV DRGYNSLEVF TILLLLKARH
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINNLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL

Arabidopsis Description

FYPP1Phytochrome-associated serine/threonine-protein phosphatase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX52]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.