Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 5
- plastid 1
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P25210_001 | Banana | cytosol | 96.54 | 96.24 |
| GSMUA_Achr11P... | Banana | cytosol | 89.94 | 87.73 |
| GSMUA_Achr1P01390_001 | Banana | cytosol | 89.62 | 86.63 |
| Solyc06g053630.2.1 | Tomato | cytosol | 86.16 | 85.09 |
| Solyc05g055060.2.1 | Tomato | cytosol, nucleus | 86.48 | 84.62 |
| GSMUA_Achr8P19510_001 | Banana | cytosol | 74.21 | 84.59 |
| KRG92623 | Soybean | cytosol, endoplasmic reticulum | 86.48 | 84.36 |
| KRH68801 | Soybean | cytosol, endoplasmic reticulum | 85.53 | 84.21 |
| KRG97050 | Soybean | cytosol | 85.85 | 83.74 |
| KRH34158 | Soybean | cytosol, nucleus | 85.85 | 83.74 |
| VIT_05s0049g00890.t01 | Wine grape | cytosol | 84.91 | 82.82 |
| Solyc09g090060.2.1 | Tomato | cytosol | 84.59 | 81.52 |
| PGSC0003DMT400044371 | Potato | cytosol | 84.59 | 81.52 |
| GSMUA_Achr2P15380_001 | Banana | cytosol | 81.45 | 81.19 |
| KRG92313 | Soybean | cytosol, nucleus | 83.33 | 80.3 |
| KRH69127 | Soybean | cytosol | 80.19 | 79.94 |
| GSMUA_Achr2P04120_001 | Banana | cytosol | 76.1 | 79.61 |
| GSMUA_Achr10P... | Banana | cytosol | 79.87 | 79.38 |
| PGSC0003DMT400041996 | Potato | cytosol | 85.85 | 79.36 |
| KRH31706 | Soybean | cytosol | 81.13 | 76.33 |
| GSMUA_Achr4P09690_001 | Banana | cytosol | 73.9 | 76.3 |
| KRH34478 | Soybean | cytosol | 82.39 | 75.94 |
| GSMUA_Achr8P24570_001 | Banana | cytosol | 72.64 | 75.49 |
| VIT_14s0036g00370.t01 | Wine grape | cytosol | 85.85 | 75.21 |
| GSMUA_Achr7P10840_001 | Banana | cytosol | 73.27 | 72.81 |
| GSMUA_Achr11P... | Banana | cytosol | 70.13 | 70.57 |
| GSMUA_Achr2P02240_001 | Banana | cytosol | 68.24 | 67.6 |
| PGSC0003DMT400060162 | Potato | cytosol | 86.79 | 66.83 |
| GSMUA_Achr8P06590_001 | Banana | cytosol | 56.92 | 64.64 |
| GSMUA_Achr11P... | Banana | cytosol | 69.5 | 62.61 |
| GSMUA_Achr4P31160_001 | Banana | cytosol | 78.93 | 57.97 |
| GSMUA_Achr9P11070_001 | Banana | cytosol | 41.82 | 45.55 |
| GSMUA_Achr7P06210_001 | Banana | cytosol | 43.08 | 45.07 |
| GSMUA_Achr1P11730_001 | Banana | cytosol | 42.77 | 44.44 |
| GSMUA_Achr7P23950_001 | Banana | cytosol | 42.45 | 44.12 |
| GSMUA_Achr1P09340_001 | Banana | cytosol | 41.82 | 43.61 |
| GSMUA_Achr4P28610_001 | Banana | cytosol | 42.45 | 42.99 |
| GSMUA_Achr2P12450_001 | Banana | cytosol | 42.45 | 42.99 |
| GSMUA_Achr8P15360_001 | Banana | cytosol | 42.45 | 41.93 |
| GSMUA_AchrUn_... | Banana | cytosol | 38.68 | 40.59 |
| GSMUA_Achr9P21520_001 | Banana | cytosol | 38.36 | 40.4 |
| GSMUA_Achr4P22190_001 | Banana | cytosol | 30.82 | 38.43 |
| GSMUA_Achr3P20430_001 | Banana | plastid | 38.99 | 35.13 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.45 | 28.48 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.1.1 | Gene3D:3.60.21.10 | InterPro:Calcineurin-like_PHP_ApaH | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004721 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr4G29300_001 |
| EnsemblPlants:GSMUA_Achr4P29300_001 | EnsemblPlants:GSMUA_Achr4T29300_001 | InterPro:IPR029052 | UniProt:M0ST42 | InterPro:Metallo-depent_PP-like | PFAM:PF00149 |
| PFAM:PF16891 | PRINTS:PR00114 | ScanProsite:PS00125 | PANTHER:PTHR11668 | PANTHER:PTHR11668:SF403 | SMART:SM00156 |
| SUPFAM:SSF56300 | InterPro:STPPase_N | InterPro:Ser/Thr-sp_prot-phosphatase | UniParc:UPI000294F2DA | : | : |
Description
Serine/threonine-protein phosphatase PP1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G29300_001]
Coordinates
chr4:+:27314187..27319989
Molecular Weight (calculated)
36026.4 Da
IEP (calculated)
5.081
GRAVY (calculated)
-0.175
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPKVLDGII QRLLEVKGGR PGKQVQLLEA EIRQLCLVSK DIFLQQPNLL ELEAPIKICG DIHGQYSDLL RLFEYGGLPP QANYLFLGDY VDRGKQSLET
101: ICLLLAYKIK YPENFFLLRG NHECASINRI YGFYDECKRR FNVRLWKVFT DCFNCLPVAA LIDEKILCMH GGLSPDLNNL DQIRNLARPT DVPDNGLLCD
201: LLWSDPSKEI QGWGMNDRGV SYTFGPDRVT DFLQKHDLDL ICRAHQVVED GYEFFADRQL VTIFSAPNYC GEFDNAGAMM SVDETLMCSF QILKPAASEK
301: KRFGFGSTAA SRTGTPAW
101: ICLLLAYKIK YPENFFLLRG NHECASINRI YGFYDECKRR FNVRLWKVFT DCFNCLPVAA LIDEKILCMH GGLSPDLNNL DQIRNLARPT DVPDNGLLCD
201: LLWSDPSKEI QGWGMNDRGV SYTFGPDRVT DFLQKHDLDL ICRAHQVVED GYEFFADRQL VTIFSAPNYC GEFDNAGAMM SVDETLMCSF QILKPAASEK
301: KRFGFGSTAA SRTGTPAW
001: MATTTTTQGQ QTAIDSAVLD DIIRRLTEVR LARPGKQVQL SEAEIKQLCT TARDIFLQQP NLLELEAPIK ICGDIHGQYS DLLRLFEYGG FPPSANYLFL
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I
101: GDYVDRGKQS LETICLLLAY KIKYPGNFFL LRGNHECASI NRIYGFYDEC KRRFNVRVWK VFTDCFNCLP VAALIDDKIL CMHGGLSPDL DHLDEIRNLP
201: RPTMIPDTGL LCDLLWSDPG KDVKGWGMND RGVSYTFGPD KVSEFLTKHD LDLVCRAHQV VEDGYEFFAD RQLVTVFSAP NYCGEFDNAG AMMSVDENLM
301: CSFQILKPAE KKTKFMMSTK I
Arabidopsis Description
TOPP4Serine/threonine-protein phosphatase [Source:UniProtKB/TrEMBL;Acc:A0A178VUA1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.