Factsheet for GSMUA_AchrUn_randomP23060_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr4P00500_001
GSMUA_Achr6P02720_001
GSMUA_Achr7P17990_001
GSMUA_Achr7P20990_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10430.1	GSMUA_Achr4P00500_001	AT3G47620.1	21798944
AT1G10430.1	GSMUA_Achr6P02720_001	AT3G47620.1	21798944
AT1G10430.1	GSMUA_Achr7P17990_001	AT3G47620.1	21798944
AT1G10430.1	GSMUA_Achr7P20990_001	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P23950_001	Banana	cytosol	62.66	97.06
KRH69421	Soybean	cytosol, nucleus	61.18	94.77
KRH45793	Soybean	cytosol, nucleus	60.97	94.44
Solyc01g011340.2.1	Tomato	cytosol, plastid	60.97	94.44
PGSC0003DMT400013570	Potato	cytosol	60.97	94.44
Os06t0574500-01	Rice	cytosol, plasma membrane	60.97	94.44
KRH74722	Soybean	cytosol, nucleus	60.76	94.12
EER88560	Sorghum	cytosol	60.76	94.12
GSMUA_Achr1P11730_001	Banana	cytosol	60.76	94.12
KRG99209	Soybean	cytosol, nucleus	60.55	93.79
Os02t0217600-02	Rice	cytosol, plasma membrane	60.55	93.49
PGSC0003DMT400004853	Potato	cytosol	60.34	93.46
Solyc05g006590.2.1	Tomato	cytosol	60.13	93.14
EES06511	Sorghum	cytosol	60.13	93.14
Zm00001d046369_P002	Maize	cytosol	60.13	93.14
VIT_14s0066g02240.t01	Wine grape	cytosol	59.92	92.81
VIT_17s0000g05330.t01	Wine grape	cytosol	59.7	92.48
TraesCS6D01G171400.1	Wheat	cytosol	59.7	92.48
AT1G10430.1	Thale cress	cytosol	59.7	92.48
TraesCS6B01G213200.1	Wheat	cytosol	59.7	92.48
TraesCS6A01G183700.1	Wheat	cytosol	59.7	92.48
PGSC0003DMT400058216	Potato	cytosol	59.7	92.48
VIT_01s0026g01080.t01	Wine grape	cytosol	59.49	92.16
HORVU7Hr1G086410.1	Barley	cytosol	59.49	92.16
TraesCS7D01G358600.1	Wheat	cytosol	59.49	92.16
TraesCS7B01G263500.1	Wheat	cytosol	59.28	91.83
CDY07799	Canola	cytosol	59.28	91.83
CDY34892	Canola	cytosol	59.28	91.83
TraesCS7A01G364400.1	Wheat	cytosol	59.07	91.8
Bra031712.1-P	Field mustard	cytosol	59.07	91.5
CDX93426	Canola	cytosol	59.07	91.5
CDY37977	Canola	cytosol	59.07	91.5
Bra019934.1-P	Field mustard	cytosol	58.86	91.18
CDY30909	Canola	cytosol	58.65	90.85
AT1G59830.1	Thale cress	cytosol	58.44	90.52
Bra027833.1-P	Field mustard	cytosol	58.23	90.2
CDY45151	Canola	cytosol	58.23	90.2
CDY52461	Canola	cytosol	58.02	89.87
CDY38778	Canola	cytosol	57.81	89.54
Bra016247.1-P	Field mustard	cytosol	57.81	89.54
CDY11632	Canola	cytosol	57.81	89.54
AT1G69960.1	Thale cress	cytosol	57.17	88.27
Zm00001d016378_P002	Maize	cytosol	59.7	83.73
Zm00001d036949_P007	Maize	cytosol	53.38	82.14
GSMUA_Achr9P11070_001	Banana	cytosol	49.37	80.14
GSMUA_Achr3P20430_001	Banana	plastid	56.96	76.49
GSMUA_Achr2P12450_001	Banana	cytosol	50.63	76.43
GSMUA_Achr4P28610_001	Banana	cytosol	50.63	76.43
HORVU6Hr1G038770.1	Barley	cytosol	59.7	74.28
GSMUA_Achr4P22190_001	Banana	cytosol	38.19	70.98
GSMUA_Achr8P15360_001	Banana	cytosol	47.89	70.5
GSMUA_Achr7P06210_001	Banana	cytosol	42.19	65.79
GSMUA_Achr1P09340_001	Banana	cytosol	41.56	64.59
Zm00001d053589_P001	Maize	cytosol	39.66	59.68
GSMUA_AchrUn_...	Banana	cytosol	35.65	55.78
GSMUA_Achr9P21520_001	Banana	cytosol	35.02	54.97
GSMUA_Achr11P...	Banana	cytosol	30.17	45.25
GSMUA_Achr4P09690_001	Banana	cytosol	28.48	43.83
GSMUA_Achr2P02240_001	Banana	cytosol	29.54	43.61
GSMUA_Achr2P04120_001	Banana	cytosol	27.64	43.09
GSMUA_Achr10P...	Banana	cytosol	28.69	42.5
GSMUA_Achr8P24570_001	Banana	cytosol	27.43	42.48
GSMUA_Achr4P29300_001	Banana	cytosol	28.48	42.45
GSMUA_Achr4P25210_001	Banana	cytosol	28.48	42.32
GSMUA_Achr2P15380_001	Banana	cytosol	28.48	42.32
GSMUA_Achr11P...	Banana	cytosol	28.69	41.72
GSMUA_Achr7P10840_001	Banana	cytosol	28.06	41.56
GSMUA_Achr8P19510_001	Banana	cytosol	24.26	41.22
GSMUA_Achr1P01390_001	Banana	cytosol	28.48	41.03
GSMUA_Achr8P06590_001	Banana	cytosol	24.05	40.71
GSMUA_Achr11P...	Banana	cytosol	29.96	40.23
GSMUA_Achr4P31160_001	Banana	cytosol	28.06	30.72

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.21.10	MapMan:50.3.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	EnsemblPlantsGene:GSMUA_AchrUn_randomG23060_001	EnsemblPlants:GSMUA_AchrUn_randomP23060_001	EnsemblPlants:GSMUA_AchrUn_randomT23060_001
InterPro:IPR029052	UniProt:M0UBL4	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PIRSF:PIRSF033096	PRINTS:PR00114
ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF248	SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase
UniParc:UPI0002968C80	SEG:seg	:	:	:	:

Description

Serine/threonine-protein phosphatase PP2A-1 catalytic subunit [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG23060_001]

Coordinates

chrchrUn_random:-:112529317..112537239

Molecular Weight (calculated)

54222.7 Da

IEP (calculated)

6.145

GRAVY (calculated)

-0.192

Length

474 amino acids

Sequence
(BLAST)

001: MPSYADLDRQ IEQLRECKFL PEAEVRALCD QARAVLVEEW NVQPVRCPVT VCGDIHGQFY DLVELFRIGG EAPDTNYLFM GDYVDRGYYS VETVTLLVAL
101: KVRYRDRITI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQI FCLHGGLSPS LDTLDNIRAL NRIQESMYSV LPRQVKKILP
201: TDSNRHVLNW ISQMGVCTNP VLSNQPDHSL TSKFSHGYTS QNVEVRHFNE SPLGRSLVPS CRTPWTIRQT GKQNPTSTAA AFLRSLVRHL LLPPPSSIAA
301: GYFFFSIHSF SFFISLLHHI ELVYLALNCR VTIINCPLET FQQLNPILCF EVEVPHEGPM CDLLWSDPDD RCGWGISPRG AGYTFGQDIA QQFNHNNGLT
401: LIARAHQLVM EGFNWCQDRN VVTVFSAPNY CYRCGNMAAI LEIGENMDQN FLQFDPAPRQ IEPDTTRKTP DYFL

Best Arabidopsis Sequence Match ( AT1G10430.1 )
(BLAST)

001: MPSNGDLDRQ IEQLMECKPL SEADVRTLCD QARAILVEEY NVQPVKCPVT VCGDIHGQFY DLIELFRIGG NAPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRLTI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRSL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAAQFNHNNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENME QNFLQFDPAP RQVEPDTTRK
301: TPDYFL

Arabidopsis Description

PP2A2Serine/threonine-protein phosphatase PP2A-2 catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q07098]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.