Factsheet for PGSC0003DMT400004853

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400001613

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G10430.1	PGSC0003DMT400001613	AT3G47620.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013570	Potato	cytosol	97.39	97.39
PGSC0003DMT400058216	Potato	cytosol	97.39	97.39
AT1G10430.1	Thale cress	cytosol	96.08	96.08
KRH69421	Soybean	cytosol, nucleus	96.08	96.08
KRH45793	Soybean	cytosol, nucleus	95.75	95.75
CDY07799	Canola	cytosol	95.42	95.42
CDY34892	Canola	cytosol	95.42	95.42
KRH74722	Soybean	cytosol, nucleus	95.42	95.42
VIT_01s0026g01080.t01	Wine grape	cytosol	95.1	95.1
Bra031712.1-P	Field mustard	cytosol	95.1	95.1
CDX93426	Canola	cytosol	95.1	95.1
KRG99209	Soybean	cytosol, nucleus	95.1	95.1
Bra019934.1-P	Field mustard	cytosol	94.77	94.77
CDY30909	Canola	cytosol	94.77	94.77
CDY37977	Canola	cytosol	94.77	94.77
EES06511	Sorghum	cytosol	94.77	94.77
Zm00001d046369_P002	Maize	cytosol	94.44	94.44
AT1G59830.1	Thale cress	cytosol	94.44	94.44
EER88560	Sorghum	cytosol	94.44	94.44
Bra027833.1-P	Field mustard	cytosol	94.12	94.12
Bra016247.1-P	Field mustard	cytosol	94.12	94.12
CDY52461	Canola	cytosol	94.12	94.12
CDY45151	Canola	cytosol	94.12	94.12
CDY38778	Canola	cytosol	94.12	94.12
GSMUA_Achr7P23950_001	Banana	cytosol	93.79	93.79
CDY11632	Canola	cytosol	93.79	93.79
Os06t0574500-01	Rice	cytosol, plasma membrane	93.79	93.79
Os02t0217600-02	Rice	cytosol, plasma membrane	93.79	93.49
TraesCS6D01G171400.1	Wheat	cytosol	93.46	93.46
TraesCS7D01G358600.1	Wheat	cytosol	93.46	93.46
HORVU7Hr1G086410.1	Barley	cytosol	93.46	93.46
TraesCS6B01G213200.1	Wheat	cytosol	93.46	93.46
TraesCS6A01G183700.1	Wheat	cytosol	93.46	93.46
TraesCS7B01G263500.1	Wheat	cytosol	93.14	93.14
TraesCS7A01G364400.1	Wheat	cytosol	92.81	93.11
GSMUA_Achr1P11730_001	Banana	cytosol	92.81	92.81
AT1G69960.1	Thale cress	cytosol	92.48	92.18
Zm00001d016378_P002	Maize	cytosol	94.12	85.21
Zm00001d036949_P007	Maize	cytosol	83.01	82.47
PGSC0003DMT400081973	Potato	cytosol	79.41	77.64
PGSC0003DMT400079934	Potato	cytosol	78.43	76.92
HORVU6Hr1G038770.1	Barley	cytosol	93.14	74.8
GSMUA_Achr3P20430_001	Banana	plastid	83.99	72.8
PGSC0003DMT400057148	Potato	cytosol	65.69	65.9
Zm00001d053589_P001	Maize	cytosol	63.4	61.59
GSMUA_AchrUn_...	Banana	cytosol	93.46	60.34
PGSC0003DMT400039336	Potato	cytosol	57.19	57.76
PGSC0003DMT400069607	Potato	cytosol	55.88	51.04
PGSC0003DMT400017290	Potato	cytosol	45.42	45.72
PGSC0003DMT400078199	Potato	cytosol	45.42	44.84
PGSC0003DMT400063710	Potato	cytosol	45.1	43.81
PGSC0003DMT400053683	Potato	cytosol	34.31	40.23
PGSC0003DMT400044371	Potato	cytosol	42.81	39.7
PGSC0003DMT400041996	Potato	cytosol	43.79	38.95
PGSC0003DMT400060162	Potato	cytosol	44.77	33.17

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102595411	MapMan:13.4.1.2.3	MapMan:18.4.24.1.2.5	Gene3D:3.60.21.10
InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052
UniProt:M0ZP32	InterPro:Metallo-depent_PP-like	PFAM:PF00149	EnsemblPlantsGene:PGSC0003DMG400001929	PGSC:PGSC0003DMG400001929	EnsemblPlants:PGSC0003DMT400004853
PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF384	SMART:SM00156	SUPFAM:SSF56300
InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI00029480D0	RefSeq:XP_006363544.1	RefSeq:XP_006363545.1	:	:

Description

Serine/threonine-protein phosphatase [Source:PGSC_GENE;Acc:PGSC0003DMG400001929]

Coordinates

chr00:-:12415203..12420245

Molecular Weight (calculated)

35000.5 Da

IEP (calculated)

4.504

GRAVY (calculated)

-0.307

Length

306 amino acids

Sequence
(BLAST)

001: MPSNADVDRQ IEQLMECKPL PEAEVKTLCE QARAILVEEW NVQPVKCPVT VCGDIHGQFY DLIELFRIGG NAPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRITI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRSL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IASQFNHTNG LTLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENME QNFLQFDPAP RQIEPDTTRK
301: TPDYFL

Best Arabidopsis Sequence Match ( AT1G10430.1 )
(BLAST)

001: MPSNGDLDRQ IEQLMECKPL SEADVRTLCD QARAILVEEY NVQPVKCPVT VCGDIHGQFY DLIELFRIGG NAPDTNYLFM GDYVDRGYYS VETVSLLVAL
101: KVRYRDRLTI LRGNHESRQI TQVYGFYDEC LRKYGNANVW KYFTDLFDYL PLTALIESQV FCLHGGLSPS LDTLDNIRSL DRIQEVPHEG PMCDLLWSDP
201: DDRCGWGISP RGAGYTFGQD IAAQFNHNNG LSLISRAHQL VMEGFNWCQD KNVVTVFSAP NYCYRCGNMA AILEIGENME QNFLQFDPAP RQVEPDTTRK
301: TPDYFL

Arabidopsis Description

PP2A2Serine/threonine-protein phosphatase PP2A-2 catalytic subunit [Source:UniProtKB/Swiss-Prot;Acc:Q07098]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.