Factsheet for PGSC0003DMT400069607

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400012249
PGSC0003DMT400018574
PGSC0003DMT400072260

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50370.1	PGSC0003DMT400018574	AT3G56850.1	23404889
AT1G50370.1	PGSC0003DMT400072260	AT3G56850.1	23404889
AT1G50370.1	PGSC0003DMT400012249	AT4G25200.1	21798944
AT3G19980.1	PGSC0003DMT400018574	AT3G56850.1	23404889
AT3G19980.1	PGSC0003DMT400072260	AT3G56850.1	23404889

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g072140.2.1	Tomato	cytosol	90.15	99.67
VIT_10s0071g00950.t01	Wine grape	cytosol	88.66	98.02
PGSC0003DMT400039336	Potato	cytosol	88.36	97.69
AT3G19980.1	Thale cress	cytosol	88.06	97.36
KRG90576	Soybean	cytosol, nucleus	88.06	97.36
AT1G50370.1	Thale cress	cytosol	87.76	97.03
KRH36174	Soybean	cytosol, nucleus	87.76	97.03
KRH36176	Soybean	cytosol	87.46	96.7
GSMUA_AchrUn_...	Banana	cytosol	87.46	96.7
GSMUA_Achr9P21520_001	Banana	cytosol	87.16	96.69
CDY25366	Canola	cytosol	85.97	95.05
Os01t0691700-01	Rice	cytosol, plasma membrane	85.67	94.72
CDY70204	Canola	cytosol	85.67	94.72
CDY33438	Canola	cytosol	85.67	94.72
Bra038247.1-P	Field mustard	cytosol	85.67	94.72
TraesCS3A01G261200.1	Wheat	cytosol	85.37	94.39
TraesCS3B01G294200.1	Wheat	cytosol, golgi, plastid	85.37	94.39
CDY24572	Canola	cytosol	85.37	94.39
TraesCS3D01G261300.1	Wheat	cytosol	85.37	94.39
HORVU3Hr1G064290.2	Barley	cytosol	85.37	94.39
Bra027930.1-P	Field mustard	cytosol	52.54	94.12
CDX82268	Canola	cytosol	85.07	94.06
Bra001770.1-P	Field mustard	cytosol	85.07	94.06
EES01303	Sorghum	cytosol	83.88	92.74
Zm00001d011634_P003	Maize	cytosol	83.88	92.74
TraesCS1D01G380200.1	Wheat	cytosol	82.69	91.42
CDY69052	Canola	cytosol	85.67	91.4
KRH40922	Soybean	cytosol	80.9	88.27
CDY03595	Canola	cytosol	85.67	86.71
TraesCS1B01G393500.1	Wheat	cytosol	78.81	86.56
Bra035830.1-P	Field mustard	cytosol	85.37	84.87
Bra014246.1-P	Field mustard	cytosol	85.97	83.0
HORVU1Hr1G083000.1	Barley	cytosol	82.99	77.87
TraesCS1A01G373300.1	Wheat	cytosol	82.09	76.82
PGSC0003DMT400057148	Potato	cytosol	53.73	59.02
PGSC0003DMT400004853	Potato	cytosol	51.04	55.88
PGSC0003DMT400058216	Potato	cytosol	50.75	55.56
PGSC0003DMT400013570	Potato	cytosol	50.75	55.56
PGSC0003DMT400081973	Potato	cytosol	49.85	53.35
PGSC0003DMT400079934	Potato	cytosol	49.25	52.88
PGSC0003DMT400017290	Potato	cytosol	37.01	40.79
PGSC0003DMT400063710	Potato	cytosol	37.91	40.32
PGSC0003DMT400078199	Potato	cytosol	36.72	39.68
CDY36067	Canola	plasma membrane	85.07	38.83
PGSC0003DMT400053683	Potato	cytosol	28.66	36.78
PGSC0003DMT400044371	Potato	cytosol	36.12	36.67
PGSC0003DMT400041996	Potato	cytosol	37.61	36.63
PGSC0003DMT400060162	Potato	cytosol	37.31	30.27

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102600476	MapMan:50.3.1	InterPro:Calcineurin-like_PHP_ApaH	GO:GO:0003674
GO:GO:0003824	GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	UniProt:M1CKR3	PFAM:PF00149	EnsemblPlantsGene:PGSC0003DMG400027061
PGSC:PGSC0003DMG400027061	EnsemblPlants:PGSC0003DMT400069607	PRINTS:PR00114	ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF400
SMART:SM00156	SUPFAM:SSF56300	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI00029532BD	:	:

Description

Phytochrome-associated serine/threonine protein phosphatase 3 [Source:PGSC_GENE;Acc:PGSC0003DMG400027061]

Coordinates

chr6:+:52929110..52935607

Molecular Weight (calculated)

38486.8 Da

IEP (calculated)

4.992

GRAVY (calculated)

-0.232

Length

335 amino acids

Sequence
(BLAST)

001: MDLDQWITKV KEGQHLAEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFHTGGHVPE TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQRF ARVSSSTFGI LGFSNDVIQK VDRSPTFVIY VYGFYDECQR KYGNANAWRY CTDVFDYLTL SAIIDGTVLC VHGGLSPDVR
201: TIDQIRVIER NCEIPHEGPF CDLMWSDPEE IETWAVSPRG AGWLFGSRVT TEFNHINKLD LVCRAHQLVQ EGLKYMFQDK GLVTVWSAPN YCYRCGNVAS
301: ILSFNENMER EVKFFTETEE NNQMRGPRTG VPYFL

Best Arabidopsis Sequence Match ( AT3G19980.1 )
(BLAST)

001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL

Arabidopsis Description

FYPP3Phytochrome-associated serine/threonine-protein phosphatase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.