CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 6
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER89430
EER89431
KXG19616
OQU75612
OQU75930
OQU76071
OQU85385

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G50370.1	EER89430	AT4G25200.1	21798944
AT1G50370.1	EER89431	AT4G25200.1	21798944
AT1G50370.1	KXG19616	AT4G25200.1	21798944
AT1G50370.1	OQU75612	AT4G25200.1	21798944
AT1G50370.1	OQU75930	AT4G25200.1	21798944
AT1G50370.1	OQU76071	AT4G25200.1	21798944
AT1G50370.1	OQU85385	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011634_P003	Maize	cytosol	100.0	100.0
TraesCS3D01G261300.1	Wheat	cytosol	96.37	96.37
TraesCS3B01G294200.1	Wheat	cytosol, golgi, plastid	96.37	96.37
TraesCS3A01G261200.1	Wheat	cytosol	96.37	96.37
Os01t0691700-01	Rice	cytosol, plasma membrane	96.37	96.37
HORVU3Hr1G064290.2	Barley	cytosol	96.37	96.37
Solyc06g072140.2.1	Tomato	cytosol	93.07	93.07
GSMUA_AchrUn_...	Banana	cytosol	93.07	93.07
GSMUA_Achr9P21520_001	Banana	cytosol	92.41	92.72
VIT_10s0071g00950.t01	Wine grape	cytosol	92.41	92.41
KRG90576	Soybean	cytosol, nucleus	92.41	92.41
KRH36174	Soybean	cytosol, nucleus	92.08	92.08
PGSC0003DMT400039336	Potato	cytosol	91.75	91.75
KRH36176	Soybean	cytosol	91.75	91.75
AT3G19980.1	Thale cress	cytosol	91.42	91.42
Solyc03g019900.2.1	Tomato	cytosol	91.42	91.42
AT1G50370.1	Thale cress	cytosol	91.42	91.42
Bra038247.1-P	Field mustard	cytosol	91.42	91.42
CDY33438	Canola	cytosol	91.42	91.42
CDY70204	Canola	cytosol	91.42	91.42
CDY25366	Canola	cytosol	90.76	90.76
CDY24572	Canola	cytosol	90.1	90.1
Bra001770.1-P	Field mustard	cytosol	90.1	90.1
CDX82268	Canola	cytosol	90.1	90.1
Bra027930.1-P	Field mustard	cytosol	55.45	89.84
CDY69052	Canola	cytosol	91.75	88.53
CDY03595	Canola	cytosol	91.75	83.99
PGSC0003DMT400069607	Potato	cytosol	92.74	83.88
KRH40922	Soybean	cytosol	84.82	83.71
Bra035830.1-P	Field mustard	cytosol	90.76	81.6
Bra014246.1-P	Field mustard	cytosol	92.08	80.4
EER98649	Sorghum	cytosol	59.41	58.63
EER88560	Sorghum	cytosol	56.44	55.88
EES06511	Sorghum	cytosol	56.11	55.56
KXG37326	Sorghum	cytosol	56.11	55.37
EER94259	Sorghum	cytosol	55.45	53.33
EER95434	Sorghum	plastid	55.45	43.64
EES02921	Sorghum	cytosol	42.57	39.69
EES13960	Sorghum	cytosol	38.28	38.03
CDY36067	Canola	plasma membrane	90.1	37.19
EER95117	Sorghum	cytosol	38.28	36.02
EER90463	Sorghum	cytosol	40.92	35.53
EER89259	Sorghum	cytosol	35.64	33.33
KXG31386	Sorghum	cytosol	38.94	32.15
OQU77459	Sorghum	cytosol	41.58	26.53

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.1.5	Gene3D:3.60.21.10	EntrezGene:8063094	UniProt:C5XHF2
InterPro:Calcineurin-like_PHP_ApaH	EnsemblPlants:EES01303	ProteinID:EES01303	ProteinID:EES01303.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR029052	InterPro:Metallo-depent_PP-like	PFAM:PF00149	PRINTS:PR00114
ScanProsite:PS00125	PANTHER:PTHR11668	PANTHER:PTHR11668:SF24	SMART:SM00156	EnsemblPlantsGene:SORBI_3003G264200	SUPFAM:SSF56300
unigene:Sbi.865	InterPro:Ser/Thr-sp_prot-phosphatase	UniParc:UPI000194B268	RefSeq:XP_002456183.1	:	:

Description

hypothetical protein

Coordinates

chr3:+:60130014..60135447

Molecular Weight (calculated)

34756.4 Da

IEP (calculated)

4.870

GRAVY (calculated)

-0.217

Length

303 amino acids

Sequence
(BLAST)

001: MDLDLWISKV KEGQHLAEHE LQSLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFATGGHVPE TNYIFMGDFV DRGFNSLEVF TILLLLKARY
101: PAHITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IINGQVLCVH GGLSPDVRTI DQIRTIDRNC EIPHEGPFCD LMWSDPEEIE
201: TWAVSPRGAG WLFGSRVTAE FNFVNGIELV CRAHQLVQEG LKYMFQEKGL VTVWSAPNYC YRCGNVASIL SFDEKMERDV KFFTETEENN QMRGPRTAVP
301: YFL

Best Arabidopsis Sequence Match ( AT3G19980.1 )
(BLAST)

001: MDLDQWISKV KDGQHLSEDE LQLLCEYVKE ILIEESNVQP VNSPVTVCGD IHGQFHDLMK LFQTGGHVPD TNYIFMGDFV DRGYNSLEVF TILLLLKARY
101: PANITLLRGN HESRQLTQVY GFYDECQRKY GNANAWRYCT DVFDYLTLSA IIDGTVLCVH GGLSPDVRTI DQIRLIERNC EIPHEGPFCD LMWSDPEDIE
201: TWAVSPRGAG WLFGSRVTTE FNHINKLDLV CRAHQLVQEG LKYMFQDKGL VTVWSAPNYC YRCGNVASIL SFNDNMEREV KFFTETEENN QMRGPRTGVP
301: YFL

Arabidopsis Description

FYPP3Phytochrome-associated serine/threonine-protein phosphatase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHE7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.